RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CBLCQ9ULV8 474 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DTX4Q9Y2E6 619 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GPR55Q9Y2T6 319 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LYVE1Q9Y5Y7 322 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CCDC187A0A096LP49 1063 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NPIPA5A0A0B4J1W7 369 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C2orf92A0A1B0GVN3 265 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NPIPA7E9PJI5 369 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 H0YAE9 185 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PEX12O00623 359 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 AP3D1O14617 1153 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CNOT3O75175 753 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UGT2B17O75795 530 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SNAP29O95721 258 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EPPINO95925 133 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MT-CO3P00414 261 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 H1F0P07305 194 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NPIPA8P0DM63 369 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NID1P14543 1247 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CDH2P19022 906 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DRD5P21918 477 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TGM1P22735 817 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IGFBP5P24593 272 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IFNA8P32881 189 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PIGAP37287 484 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CAPGP40121 348 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ETV5P41161 510 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HMGA2P52926 109 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PSMD4P55036 377 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FOXL2P58012 376 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TAS2R41P59536 307 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EEF1A1P68104 462 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EIF3IQ13347 325 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GANABQ14697 944 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LAPTM4AQ15012 233 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PDK3Q15120 406 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TRIP6Q15654 476 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NNATQ16517 81 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MAPK14Q16539 360 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DECR1Q16698 335 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MICAQ29983 383 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EXOC3L2Q2M3D2 409 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FGD3Q5JSP0 725 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RNF220Q5VTB9 566 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 AP1ARQ63HQ0 302 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LCN10Q6JVE6 187 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DHRS13Q6UX07 377 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZAR1Q86SH2 424 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GLRX5Q86SX6 157 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PIP4P1Q86T03 277 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 COMTD1Q86VU5 262 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CHERPQ8IWX8 916 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 BCORP1Q8N888 145 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ATG16L2Q8NAA4 619 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GALNT6Q8NCL4 622 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PIK3C3Q8NEB9 887 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 B3GNT7Q8NFL0 401 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR10G2Q8NGC3 310 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR4C15Q8NGM1 316 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR6T1Q8NGN1 323 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR52J3Q8NH60 311 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CYGBQ8WWM9 190 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TFAP2CQ92754 450 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LCORQ96JN0 433 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CNBD2Q96M20 576 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PRRC1Q96M27 445 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ALPK1Q96QP1 1244 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TAAR9Q96RI9 348 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GAL3ST4Q96RP7 486 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 BARD1Q99728 777 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 WFDC6Q9BQY6 131 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FNDC11Q9BVV2 318 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DDA1Q9BW61 102 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 AKIRIN1Q9H9L7 192 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NMNAT1Q9HAN9 279 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ACER3Q9NUN7 267 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TOR4AQ9NXH8 423 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RHCGQ9UBD6 479 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PISDQ9UG56 409 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KCND3Q9UK17 655 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MRTO4Q9UKD2 239 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ACAD8Q9UKU7 415 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TMCC3Q9ULS5 477 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 A4GNTQ9UNA3 340 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CHST2Q9Y4C5 530 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PCDHGA10Q9Y5H3 936 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 B3GALT1Q9Y5Z6 326 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EXPH5Q8NEV8 1989 aa7.07□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IGHV3-20A0A0C4DH32 117 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CENPVL1A0A0U1RR11 272 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CDHR4A6H8M9 788 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ARRDC5A6NEK1 342 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FRG2CA6NGY1 282 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SAGE2PA6NJ88 616 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NPIPB9F8W1W9 429 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FAAHO00519 579 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FFAR1O14842 300 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PCDH17O14917 1159 aa7.06□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PLD2O14939 933 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms