RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SLC39A3Q9BRY0 314 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 THUMPD3Q9BV44 507 aaKnown RBP6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC25A18Q9H1K4 315 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 NDE1Q9NXR1 346 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 ANKRD10Q9NXR5 420 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 LRFN1Q9P244 771 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 P2RX2Q9UBL9 471 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 LIPT1Q9Y234 373 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 PCDHGB6Q9Y5F9 930 aa6.98□□□□□ -1.29
HMGXB3-204ENST00000513318 FAM208BQ5VWN6 2430 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 TRAV17A0A0B4J275 112 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 GXYLT2A0PJZ3 443 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 K7EM74 188 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 HS6ST1O60243 411 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 UGT2B11O75310 529 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC25A12O75746 678 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 NEURL1O76050 574 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CBX6O95503 412 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 IL33O95760 270 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 F10P00742 488 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 C1QCP02747 245 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 PDGFAP04085 211 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 GUSBP08236 651 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ARAFP10398 606 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ETFAP13804 333 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ATP6V1C1P21283 382 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC6A2P23975 617 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CPA2P48052 419 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 RFX3P48380 749 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CD97P48960 835 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ST13P50502 369 aaKnown RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CRISP3P54108 245 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 FBXW4P57775 412 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 MXRA7P84157 204 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 POU4F2Q12837 409 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 GNA13Q14344 377 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CAPRIN1Q14444 709 aaKnown RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CYP51A1Q16850 503 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ARHGAP11BQ3KRB8 267 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 TBCELQ5QJ74 424 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 GCNT6Q5T4J0 391 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC22A10Q63ZE4 541 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 NANOGP8Q6NSW7 305 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 C8orf82Q6P1X6 216 aaPredicted RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 TMEM81Q6P7N7 255 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 FIGNL1Q6PIW4 674 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 Q6ZS92 163 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 NUP54Q7Z3B4 507 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 PGAM4Q8N0Y7 254 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 RBMXL3Q8N7X1 1067 aaKnown RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 PSD4Q8NDX1 1056 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 FAM13CQ8NE31 585 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 BOD1L1Q8NFC6 3051 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 OR10G3Q8NGC4 313 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 FAM110BQ8TC76 370 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 PAQR8Q8TEZ7 354 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 RAB8BQ92930 207 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 MED12Q93074 2177 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 HGDQ93099 445 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNF775Q96BV0 537 aaPredicted RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 EFHD2Q96C19 240 aaPredicted RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 TMCO6Q96DC7 493 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 NSL1Q96IY1 281 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 C5orf34Q96MH7 638 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 COL21A1Q96P44 957 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SIGLEC12Q96PQ1 595 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ADOQ96SZ5 270 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SDF2Q99470 211 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 HOPXQ9BPY8 73 aaPredicted RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 GPATCH1Q9BRR8 931 aaKnown RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SPATA9Q9BWV2 254 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNF350Q9GZX5 532 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 IKZF5Q9H5V7 419 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 TMEM38AQ9H6F2 299 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 KAT8Q9H7Z6 458 aaKnown RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 NANOGQ9H9S0 305 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 A4GALTQ9NPC4 353 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 POLE3Q9NRF9 147 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 SACM1LQ9NTJ5 587 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 PLA2G3Q9NZ20 509 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CALML5Q9NZT1 146 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CNIH4Q9P003 139 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 AP3M1Q9Y2T2 418 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 KLF13Q9Y2Y9 288 aaPredicted RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 CHCHD2Q9Y6H1 151 aaPredicted RBP6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 KCNE3Q9Y6H6 103 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 ITPR1Q14643 2758 aa6.97□□□□□ -1.29
HMGXB3-204ENST00000513318 NBEAQ8NFP9 2946 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ANKRD33BA6NCL7 494 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 PRAMEF25A6NGN4 478 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 CCT8L1PA6NM43 557 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 ATXN7O15265 892 aaPredicted RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 RRP9O43818 475 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 KIAA0513O60268 411 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 NME2P1O60361 137 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 TNFRSF21O75509 655 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 STX11O75558 287 aa6.96□□□□□ -1.3
HMGXB3-204ENST00000513318 UBOX5O94941 541 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms