RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TMED10P49755 219 aaKnown RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 RGS4P49798 205 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 CDH11P55287 796 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 AP1S2P56377 157 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 CLDN20P56880 219 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 RPP38P78345 283 aaKnown RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 MPP2Q14168 576 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 NNATQ16517 81 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 PPP1R3AQ16821 1122 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 AWAT1Q58HT5 328 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 TECRLQ5HYJ1 363 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 OR5M10Q6IEU7 315 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 LRRC8EQ6NSJ5 796 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 TMEM81Q6P7N7 255 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 CROCCP2Q86T23 111 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 TBC1D1Q86TI0 1168 aaPredicted RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 PLCZ1Q86YW0 608 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 ST13P4Q8IZP2 240 aaPredicted RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 LRRC17Q8N6Y2 441 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 ZNF615Q8N8J6 731 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 SNX31Q8N9S9 440 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 OR6K3Q8NGY3 331 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 ATOH8Q96SQ7 321 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 BHLHE41Q9C0J9 482 aaPredicted RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 NXF5Q9H1B4 397 aaKnown RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 OR10A4Q9H209 315 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 ALG9Q9H6U8 611 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 EHD3Q9NZN3 535 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 ZNF175Q9Y473 711 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 PCNX3Q9H6A9 2034 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 PRAMEF25A6NGN4 478 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 SEC14L5O43304 696 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 TYROBPO43914 113 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 UGT2B11O75310 529 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 SH3BGRLO75368 114 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 GCM2O75603 506 aaPredicted RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 NTN1O95631 604 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 MTHFD2P13995 350 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 HIST1H1TP22492 207 aaPredicted RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 ADH6P28332 368 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CRHR1P34998 444 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 GDF5P43026 501 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 NR4A2P43354 598 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 MAGOHP61326 146 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 ATP6V0D1P61421 351 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 HMGCS1Q01581 520 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ACAP2Q15057 778 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 RAB35Q15286 201 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 AGAP6Q5VW22 663 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 HLA-DQA1Q5Y7H0 255 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 FIGNL1Q6PIW4 674 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ARFGAP2Q8N6H7 521 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 TTLQ8NG68 377 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 OR5M1Q8NGP8 315 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 PIWIL2Q8TC59 973 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 FAM216AQ8WUB2 273 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 RIT1Q92963 219 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 HBEGFQ99075 208 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CAPS2Q9BXY5 557 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 RPF2Q9H7B2 306 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 NT5DC2Q9H857 520 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 FOLH1BQ9HBA9 442 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 NMRAL1Q9HBL8 299 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 MKS1Q9NXB0 559 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 KLRF1Q9NZS2 232 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 SLC17A7Q9P2U7 560 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 DCDC2Q9UHG0 476 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 DKKL1Q9UK85 242 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ZNF337Q9Y3M9 751 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 KCNE2Q9Y6J6 123 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 A0A0A6YYJ9 748 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ERICH4A6NGS2 130 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ANKDD1BA6NHY2 528 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 GLOD5A6NK44 160 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 E7EQL1 145 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 SLCO1B7G3V0H7 640 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 UBXN8O00124 270 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 COPEO14579 308 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 TAPBPO15533 448 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 GLRA3O75311 464 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 H2AFYO75367 372 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 SCELO95171 688 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 PROCP04070 461 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 GSTA1P08263 222 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 PEPDP12955 493 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CD22P20273 847 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 IL11P20809 199 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 GPX3P22352 226 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 NEK2P51955 445 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 HNRNPH2P55795 449 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 NRG3P56975 720 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 SNTA1Q13424 505 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ZSCAN26Q16670 478 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP54-211ENST00000512151 FAM83EQ2M2I3 478 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 NUP54Q7Z3B4 507 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CCDC91Q7Z6B0 441 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 PEG10Q86TG7 708 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 ZNF454Q8N9F8 522 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 STEAP2Q8NFT2 490 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms