RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-208	ENST00000511452	DCAF13	Q9NV06	445 aa	Known RBP	2.55	□□□□□ -2
NFXL1-208	ENST00000511452	SOHLH2	Q9NX45	425 aa		2.55	□□□□□ -2
NFXL1-208	ENST00000511452	CNOT2	Q9NZN8	540 aa	Known RBP	2.55	□□□□□ -2
NFXL1-208	ENST00000511452	SENP1	Q9P0U3	644 aa		2.55	□□□□□ -2
NFXL1-208	ENST00000511452	CLEC4E	Q9ULY5	219 aa		2.55	□□□□□ -2
NFXL1-208	ENST00000511452	KIF3A	Q9Y496	699 aa		2.55	□□□□□ -2
NFXL1-208	ENST00000511452	MET	P08581	1390 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	FBLL1	A6NHQ2	334 aa	Known RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	ARHGAP42	A6NI28	874 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	NPIPA2	E9PIF3	369 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	LAT	O43561	262 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	DIRAS3	O95661	229 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	TGFA	P01135	160 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	TSPY4	P0CV99	314 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	TSPY10	P0CW01	314 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	HSPA5	P11021	654 aa	Known RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	NCF1	P14598	390 aa	Predicted RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	PTBP1	P26599	531 aa	Known RBP eCLIP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	XCR1	P46094	333 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	ACTR1A	P61163	376 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	RPS6	P62753	249 aa	Known RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	NOP14	P78316	857 aa	Known RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	IFT88	Q13099	833 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	IL18R1	Q13478	541 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	ASAH1	Q13510	395 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	RAB35	Q15286	201 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	INA	Q16352	499 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	RABL6	Q3YEC7	729 aa	Predicted RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	BOLA3	Q53S33	107 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	LGSN	Q5TDP6	509 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	IL23R	Q5VWK5	629 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	PAQR9	Q6ZVX9	377 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	MIER3	Q7Z3K6	550 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	ZNF677	Q86XU0	584 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	UBQLNL	Q8IYU4	475 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	ELMOD2	Q8IZ81	293 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	CENPS	Q8N2Z9	138 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	CCDC26	Q8TAB7	109 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	RAB7B	Q96AH8	199 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	SLC25A36	Q96CQ1	311 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	MRPL38	Q96DV4	380 aa	Known RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	DTNBP1	Q96EV8	351 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	TCEANC2	Q96MN5	208 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	TCHP	Q9BT92	498 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	CARD6	Q9BX69	1037 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	VPS37B	Q9H9H4	285 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	POLE3	Q9NRF9	147 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	EXTL2	Q9UBQ6	330 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	BARX2	Q9UMQ3	279 aa	Predicted RBP	2.54	□□□□□ -2
NFXL1-208	ENST00000511452	PLA2G4C	Q9UP65	541 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	SMC3	Q9UQE7	1217 aa		2.54	□□□□□ -2
NFXL1-208	ENST00000511452	KDR	P35968	1356 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	TRBV7-9	A0A0J9YWB2	115 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	FAM220BP	B1ANY3	271 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	GPR89A	B7ZAQ6	455 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452		H0YCG3	227 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PES1	O00541	588 aa	Known RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	NUDT21	O43809	227 aa	Known RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PALM	O75781	387 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	AKR7A3	O95154	331 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ADCY5	O95622	1261 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	OPN1MW	P04001	364 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	GPR89B	P0CG08	455 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	OPN1MW2	P0DN77	364 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	OPN1MW3	P0DN78	364 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	TOP1	P11387	765 aa	Known RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	GZMA	P12544	262 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PRG2	P13727	222 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	IGHV1-2	P23083	117 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PTPN6	P29350	595 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ADSS	P30520	456 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ACVR1B	P36896	505 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	METAP1	P53582	386 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	CCNA1	P78396	465 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	MRPS6	P82932	125 aa	Known RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PRKCE	Q02156	737 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	GBE1	Q04446	702 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	SRY	Q05066	204 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ELP6	Q0PNE2	266 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	SERTAD2	Q14140	314 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	KARS	Q15046	597 aa	Known RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PARP6	Q2NL67	630 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	CCDC40	Q4G0X9	1142 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	TMEM52B	Q4KMG9	183 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	SLC22A10	Q63ZE4	541 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ZNF57	Q68EA5	555 aa	Predicted RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	DMKN	Q6E0U4	476 aa	Predicted RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	UFSP1	Q6NVU6	142 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ZNF544	Q6NX49	715 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	NEK5	Q6P3R8	708 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	SLC39A4	Q6P5W5	647 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	PARG	Q86W56	976 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	MINDY2	Q8NBR6	621 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	OR13F1	Q8NGS4	319 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ZNF564	Q8TBZ8	553 aa	Predicted RBP	2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ADAMTS16	Q8TE57	1224 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	RNF139	Q8WU17	664 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	MCHR2	Q969V1	340 aa		2.53	□□□□□ -2
NFXL1-208	ENST00000511452	ADIPOR1	Q96A54	375 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms