RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NPSR1Q6W5P4 371 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 DEF8Q6ZN54 512 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 USP51Q70EK9 711 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 SLC29A4Q7RTT9 530 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 RANBP3LQ86VV4 465 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-209ENST00000511426 VRK2Q86Y07 508 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 ATG16L2Q8NAA4 619 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 OR10G2Q8NGC3 310 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 OR6T1Q8NGN1 323 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 OR8K3Q8NH51 312 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 DEPDC7Q96QD5 511 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 ITPAQ9BY32 194 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 B3GNT4Q9C0J1 378 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 OR8D2Q9GZM6 311 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 ZNF556Q9HAH1 456 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 PNPLA3Q9NST1 481 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 GPN3Q9UHW5 284 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-209ENST00000511426 A4GNTQ9UNA3 340 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 POFUT2Q9Y2G5 429 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 LOXL2Q9Y4K0 774 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 PCDHGA3Q9Y5H0 932 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 AK5Q9Y6K8 562 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 ZNF318Q5VUA4 2279 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 USP34Q70CQ2 3546 aa14.09□□□□□ -0.15
SCLT1-209ENST00000511426 CDHR4A6H8M9 788 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 OR2W5A6NFC9 320 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 SAGE2PA6NJ88 616 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 NPIPB9F8W1W9 429 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 UGT2B11O75310 529 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 TNFAIP8O95379 198 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 SNAP29O95721 258 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ADAP00813 363 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 SLC5A2P31639 672 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ATP12AP54707 1039 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ST3GAL3Q11203 375 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 COL9A2Q14055 689 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 EBPQ15125 230 aaKnown RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 DCST1Q5T197 706 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 CCNJQ5T5M9 372 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ANKRD37Q7Z713 158 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 PIP4P1Q86T03 277 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 LAPTM4BQ86VI4 370 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 CACTIN-AS1Q8N1I8 211 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 PARP8Q8N3A8 854 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF527Q8NB42 609 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 B3GNT7Q8NFL0 401 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 TP53INP1Q96A56 240 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 HSPBAP1Q96EW2 488 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 CNBD2Q96M20 576 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ALPK1Q96QP1 1244 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 TAAR9Q96RI9 348 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 FNDC11Q9BVV2 318 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 RSPO3Q9BXY4 272 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ULBP3Q9BZM4 244 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 SEMA4CQ9C0C4 833 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 QRSL1Q9H0R6 528 aaKnown RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 SMURF2Q9HAU4 748 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 BATF3Q9NR55 127 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 TESQ9UGI8 421 aaKnown RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 MAGED1Q9Y5V3 778 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 HSPE1-MOB4S4R3N1 261 aa14.08□□□□□ -0.16
SCLT1-209ENST00000511426 COL27A1Q8IZC6 1860 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-209ENST00000511426 C2orf92A0A1B0GVN3 265 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 GXYLT2A0PJZ3 443 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 M0R3H8 397 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 FFAR1O14842 300 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 NME6O75414 186 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-209ENST00000511426 OR5F1O95221 314 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 CCL4P13236 92 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ENDOUP21128 410 aaKnown RBP14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ADH7P40394 386 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 EFNA3P52797 238 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 KEAP1Q14145 624 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 HLA-DQA1Q5Y7H0 255 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 FIGNL1Q6PIW4 674 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 UGT2A3Q6UWM9 527 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF836Q6ZNA1 936 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 RAB11FIP2Q7L804 512 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 HS3ST5Q8IZT8 346 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 OR4D11Q8NGI4 311 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 VANGL1Q8TAA9 524 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-209ENST00000511426 DOK4Q8TEW6 326 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 CYGBQ8WWM9 190 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ADIPOR1Q96A54 375 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ZG16BQ96DA0 208 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 LPAR4Q99677 370 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 CRB3Q9BUF7 120 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 GABARAPL3Q9BY60 117 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 YTHDF1Q9BYJ9 559 aaKnown RBP14.07□□□□□ -0.16
SCLT1-209ENST00000511426 TOR3AQ9H497 397 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 KRT84Q9NSB2 600 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 MGAT4BQ9UQ53 548 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 DTX4Q9Y2E6 619 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 CHST2Q9Y4C5 530 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 CCDC187A0A096LP49 1063 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 J3KTA2 159 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 IL33O95760 270 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 IGHEP01854 428 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms