RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CALML6Q8TD86 181 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 WDR34Q96EX3 536 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 SERPINB12Q96P63 405 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 CCT8L2Q96SF2 557 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 LRRC1Q9BTT6 524 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 EFCAB11Q9BUY7 163 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 C1QTNF5Q9BXJ0 243 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 WDR41Q9HAD4 459 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 NTN4Q9HB63 628 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PRM3Q9NNZ6 103 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 IARS2Q9NSE4 1012 aaKnown RBP9.44□□□□□ -0.9
SNF8-207ENST00000509995 LYARQ9NX58 379 aaKnown RBP9.44□□□□□ -0.9
SNF8-207ENST00000509995 BCAP29Q9UHQ4 241 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 TFR2Q9UP52 801 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PLLPQ9Y342 182 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 ASB4Q9Y574 426 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PCDHB14Q9Y5E9 798 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 COL7A1Q02388 2944 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 RYR2Q92736 4967 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 M0R1B8 84 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 PLPP1O14494 284 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 CLGNO14967 610 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 CLDN9O95484 217 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 AVPP01185 164 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 PABPC4LP0CB38 370 aaKnown RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 DAOP14920 347 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 PRTN3P24158 256 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 IL12BP29460 328 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 CASP2P42575 452 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 RAP1GDS1P52306 607 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 UBASH3AP57075 661 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 STX5Q13190 355 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 RIN1Q13671 783 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 MLC1Q15049 377 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 RNPS1Q15287 305 aaKnown RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 ZNF239Q16600 458 aaKnown RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 PAGE2BQ5JRK9 111 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 LGSNQ5TDP6 509 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 MRM1Q6IN84 353 aaKnown RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 FAHD2BQ6P2I3 314 aaPredicted RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 C1QL2Q7Z5L3 287 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 WDR75Q8IWA0 830 aaKnown RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 CEP112Q8N8E3 955 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 TRIM58Q8NG06 486 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 OR52N5Q8NH56 324 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 OR2V1Q8NHB1 315 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 RGMAQ96B86 450 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 FAHD2AQ96GK7 314 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 NAP1L3Q99457 506 aaPredicted RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 OR51B5Q9H339 312 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 FKRPQ9H9S5 495 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 C20orf96Q9NUD7 363 aaPredicted RBP9.43□□□□□ -0.9
SNF8-207ENST00000509995 PRSS50Q9UI38 385 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 SLC25A15Q9Y619 301 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
SNF8-207ENST00000509995 A0A0A6YYD5 115 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 NPEPPSL1A6NEC2 478 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 AKR1B15C9JRZ8 316 aaPredicted RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 PGRMC2O15173 223 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 TMPRSS11DO60235 418 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 CBX7O95931 251 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 CPMP14384 443 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 ZNF17P17021 662 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 DDX5P17844 614 aaKnown RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 MDKP21741 143 aaPredicted RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 IGHV1-2P23083 117 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 KHKP50053 298 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 SRSF4Q08170 494 aaKnown RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 MGAT2Q10469 447 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 LAPTM5Q13571 262 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 HIST2H2ACQ16777 129 aaPredicted RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 PRICKLE4Q2TBC4 344 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 HBMQ6B0K9 141 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 HIST2H2AA3Q6FI13 130 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 FAM111BQ6SJ93 734 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 ESPNLQ6ZVH7 1005 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 LARP4Q71RC2 724 aaKnown RBP eCLIP9.42□□□□□ -0.92e-6■■□□□ 12.5
SNF8-207ENST00000509995 SYT14Q8NB59 555 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 TOR1AIP2Q8NFQ8 470 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 OR51F2Q8NH61 342 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 FAM110BQ8TC76 370 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 UBE2FQ969M7 185 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 CMTM7Q96FZ5 175 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 PDLIM5Q96HC4 596 aaKnown RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 FAM167BQ9BTA0 163 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 ZNF717Q9BY31 904 aaPredicted RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 BRINP2Q9C0B6 783 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 TSPY26PQ9H489 355 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 ZMAT3Q9HA38 289 aaKnown RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 GP6Q9HCN6 339 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 ABHD10Q9NUJ1 306 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 MAT2BQ9NZL9 334 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 PRODH2Q9UF12 536 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 ZNF639Q9UID6 485 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 GPR55Q9Y2T6 319 aaPredicted RBP9.42□□□□□ -0.9
SNF8-207ENST00000509995 OARD1Q9Y530 152 aa9.42□□□□□ -0.9
SNF8-207ENST00000509995 A0A0J9YW62 118 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 TCRBV7S3A2A0A539 114 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms