RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 ROGDIQ9GZN7 287 aa8.37□□□□□ -1.07
PTPN20-223ENST00000509900 DDX47Q9H0S4 455 aaKnown RBP8.37□□□□□ -1.07
PTPN20-223ENST00000509900 DSN1Q9H410 356 aa8.37□□□□□ -1.07
PTPN20-223ENST00000509900 NT5DC2Q9H857 520 aa8.37□□□□□ -1.07
PTPN20-223ENST00000509900 TRMT6Q9UJA5 497 aaKnown RBP8.37□□□□□ -1.07
PTPN20-223ENST00000509900 ZNF490Q9ULM2 529 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-223ENST00000509900 GRIP1Q9Y3R0 1128 aa8.37□□□□□ -1.07
PTPN20-223ENST00000509900 MEGF11A6BM72 1044 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 GLOD5A6NK44 160 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 PRAMEF4O60810 478 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 EEDO75530 441 aaKnown RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 SNUPNO95149 360 aaKnown RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 BCL10O95999 233 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 GYPCP04921 128 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 SLC35E2BP0CK96 405 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 SLC35E2P0CK97 266 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 GNAZP19086 355 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 PGCP20142 388 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 S1PR1P21453 382 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 APOBEC3AP31941 199 aaPredicted RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 ZNF83P51522 516 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 HADHBP55084 474 aaKnown RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 SLAMF1Q13291 335 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 TIMM23BQ5SRD1 257 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 PRAMEF9Q5VWM5 478 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 RBM43Q6ZSC3 357 aaKnown RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 GALNT10Q86SR1 603 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 TDRPQ86YL5 185 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 KRT78Q8N1N4 520 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 OR2M3Q8NG83 312 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 OR52B6Q8NGF0 335 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 ADGRG7Q96K78 797 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 COL21A1Q96P44 957 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 LRRC37BQ96QE4 947 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 VRK1Q99986 396 aaPredicted RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 MS4A8Q9BY19 250 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 LPAR2Q9HBW0 351 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 ZBTB26Q9HCK0 441 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 MCTS1Q9ULC4 181 aaKnown RBP8.36□□□□□ -1.07
PTPN20-223ENST00000509900 AP4B1Q9Y6B7 739 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 COMMD10Q9Y6G5 202 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 NOTCH3Q9UM47 2321 aa8.36□□□□□ -1.07
PTPN20-223ENST00000509900 OR6C70A6NIJ9 312 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 CXCL13O43927 109 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 AKR1B10O60218 316 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 SH3BGRLO75368 114 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 PGM3O95394 542 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 F13BP05160 661 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 MSMBP08118 114 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 ETS1P14921 441 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 PRTN3P24158 256 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 CTNNA1P35221 906 aaKnown RBP8.35□□□□□ -1.07
PTPN20-223ENST00000509900 SLC1A2P43004 574 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 SSR2P43308 183 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 NPY2RP49146 381 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 RIN1Q13671 783 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 MORF4L2Q15014 288 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 AP5B1Q2VPB7 878 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 BEAN1Q3B7T3 259 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 FAHD2BQ6P2I3 314 aaPredicted RBP8.35□□□□□ -1.07
PTPN20-223ENST00000509900 GPR180Q86V85 440 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 BPIFB2Q8N4F0 458 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 SPATA6LQ8N4H0 392 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 SRFBP1Q8NEF9 429 aaKnown RBP8.35□□□□□ -1.07
PTPN20-223ENST00000509900 C22orf15Q8WYQ4 148 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 TMBIM1Q969X1 311 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 LRRC58Q96CX6 371 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 TMCO6Q96DC7 493 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 FAHD2AQ96GK7 314 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 C1orf147Q96MC9 270 aaPredicted RBP8.35□□□□□ -1.07
PTPN20-223ENST00000509900 TRIM54Q9BYV2 358 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 ANO10Q9NW15 660 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 MS4A12Q9NXJ0 267 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 BFARQ9NZS9 450 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 MED11Q9P086 117 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 SLC17A6Q9P2U8 582 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 ATP23Q9Y6H3 246 aa8.35□□□□□ -1.07
PTPN20-223ENST00000509900 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 DNAJC9-AS1A6NH13 148 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 M0QZ24 198 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 SAP18O00422 153 aaKnown RBP8.34□□□□□ -1.07
PTPN20-223ENST00000509900 SCAMP2O15127 329 aaKnown RBP8.34□□□□□ -1.07
PTPN20-223ENST00000509900 ACOX3O15254 700 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 HAUS5O94927 633 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 SYNGR4O95473 234 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 PNPP00491 289 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 DAOP14920 347 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 CD22P20273 847 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 TLX1P31314 330 aaPredicted RBP8.34□□□□□ -1.07
PTPN20-223ENST00000509900 GDF5P43026 501 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 PGGT1BP53609 377 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 ACAP2Q15057 778 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 STX1AQ16623 288 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 PPP1R3AQ16821 1122 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 TMEM44Q2T9K0 475 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 C18orf21Q32NC0 220 aaPredicted RBP8.34□□□□□ -1.07
PTPN20-223ENST00000509900 TMEM201Q5SNT2 666 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 C11orf63Q6NUN7 778 aa8.34□□□□□ -1.07
PTPN20-223ENST00000509900 LEG1Q6P5S2 330 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms