RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 DNAJC3Q13217 504 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 MAB21L1Q13394 359 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 IL18Q14116 193 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 EXT1Q16394 746 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 SYPL1Q16563 259 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 MAPK6Q16659 721 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 GGTA1PQ4G0N0 100 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 TMEM35AQ53FP2 167 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 SLC35D3Q5M8T2 416 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 PDZK1Q5T2W1 519 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 PLPP4Q5VZY2 271 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 TTC19Q6DKK2 380 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 TMEM225Q6GV28 225 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 BHLHB9Q6PI77 547 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 DPY19L2P2Q6ZN68 376 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 BZW1Q7L1Q6 419 aaKnown RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ITIH5Q86UX2 942 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 CCDC36Q8IYA8 594 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 KATNAL2Q8IYT4 538 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 SLC38A6Q8IZM9 456 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ZNF843Q8N446 348 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 RELL2Q8NC24 303 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 MNS1Q8NEH6 495 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 OR1J1Q8NGS3 322 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 OR13C5Q8NGS8 318 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 KCNG3Q8TAE7 436 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 PHLDA1Q8WV24 401 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ST8SIA1Q92185 356 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 SMPDL3AQ92484 453 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 KIAA1143Q96AT1 154 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 C4orf45Q96LM5 186 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 AMDHD1Q96NU7 426 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 TGM7Q96PF1 710 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 NEDD4LQ96PU5 975 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 CHP1Q99653 195 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 CCM2Q9BSQ5 444 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 RHOJQ9H4E5 214 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ZBTB20Q9HC78 741 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 SDR39U1Q9NRG7 319 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 RNF186Q9NXI6 227 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 PDP1Q9P0J1 537 aaPredicted RBP1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ZNF319Q9P2F9 582 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ERVK-18Q9QC07 812 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ZNF639Q9UID6 485 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 ADAM28Q9UKQ2 775 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 SATB2Q9UPW6 733 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 GSTK1Q9Y2Q3 226 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 R4GN57 208 aa1.72□□□□□ -2.13
XRCC4-204ENST00000509268 UMODL1Q5DID0 1318 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 KIF27Q86VH2 1401 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 MYH14Q7Z406 1995 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 LOC101059948A0A1B0GTJ6 334 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 A0A1B0GVL5 298 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 SHISA7A6NL88 538 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 GABRR3A8MPY1 467 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 HAS3O00219 553 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 IMPA2O14732 288 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 SH2D1BO14796 132 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 NVLO15381 856 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 B4GAT1O43505 415 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 WBP4O75554 376 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 TSPAN12O95859 305 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 CSTAP01040 98 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 CRYGCP07315 174 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 CRYGBP07316 175 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 IVLP07476 585 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 UBTFL6P0CB48 400 aaPredicted RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 DBTP11182 482 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 MSH3P20585 1137 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 CYP2B6P20813 491 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 HNRNPH3P31942 346 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 SSR1P43307 286 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 ALDH3B1P43353 468 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 HTR5AP47898 357 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 LEPRP48357 1165 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 PLA2G16P53816 162 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 CDH4P55283 916 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 BTG1P62324 171 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 RPS4XP62701 263 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 RPS15P62841 145 aaKnown RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 XIAPP98170 497 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 MS4A2Q01362 244 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 CNTN1Q12860 1018 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 KLF5Q13887 457 aaPredicted RBP1.71□□□□□ -2.14
XRCC4-204ENST00000509268 GRB14Q14449 540 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 KLHL40Q2TBA0 621 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 LRRC37A5PQ49AS3 106 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 NKAIN1Q4KMZ8 207 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 XKR7Q5GH72 579 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 DCAF10Q5QP82 559 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 METTL11BQ5VVY1 283 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 TMEM220Q6QAJ8 160 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 UQCC3Q6UW78 93 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 IGFL3Q6UXB1 125 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 ZNF562Q6V9R5 426 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 SH2D5Q6ZV89 423 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 ANO5Q75V66 913 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 KIAA1328Q86T90 577 aa1.71□□□□□ -2.14
XRCC4-204ENST00000509268 PAQR7Q86WK9 346 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms