RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 OR2M3Q8NG83 312 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 UBLCP1Q8WVY7 318 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 GFM2Q969S9 779 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 MTERF3Q96E29 417 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 CCT7Q99832 543 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 SLC39A3Q9BRY0 314 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 TMUB1Q9BVT8 246 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 DSN1Q9H410 356 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 ANKRA2Q9H9E1 313 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 LRTM1Q9HBL6 345 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 EML4Q9HC35 981 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FANCFQ9NPI8 374 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 GALNT8Q9NY28 637 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 ZNF175Q9Y473 711 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 POLR3HQ9Y535 204 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 AP4B1Q9Y6B7 739 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 KIAA1549Q9HCM3 1950 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 SETD2Q9BYW2 2564 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 A0A087WZY1 265 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 IGLV3-32A0A0A0MS00 114 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 A0A1W2PNV4 684 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 SH3D21A4FU49 640 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 AZIN1O14977 448 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 SCO2O43819 266 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 TRIM13O60858 407 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 KRT4P19013 534 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 STARP49675 285 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 AGFG1P52594 562 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 PRR5P85299 388 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 SNTB1Q13884 538 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 RAET1LQ5VY80 246 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 OR5M10Q6IEU7 315 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 LRIG3Q6UXM1 1119 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 LUZP2Q86TE4 346 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 MISPQ8IVT2 679 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 OR4N2Q8NGD1 307 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 REEP4Q9H6H4 257 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 ACSS1Q9NUB1 689 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 ZNF226Q9NYT6 803 aa12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 RPH3AQ9Y2J0 694 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-227ENST00000508852 ABCA4P78363 2273 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 TMEM114B3SHH9 223 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 NGFRP08138 427 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 ZNF17P17021 662 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 MAPK1P28482 360 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 GABRA3P34903 492 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 SERPINB4P48594 390 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 MANFP55145 182 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 B3GALT5-AS1P59052 145 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 SLC18A2Q05940 514 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 FOXF2Q12947 444 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 KIAA0040Q15053 153 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 KRTAP21-3Q3LHN1 58 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 OR6Y1Q8NGX8 325 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 DUSP19Q8WTR2 217 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 NRGNQ92686 78 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 PPCDCQ96CD2 204 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 C1GALT1C1Q96EU7 318 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 G6PC3Q9BUM1 346 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 BEX4Q9NWD9 120 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 MKS1Q9NXB0 559 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 NTMQ9P121 344 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 PLEKHA6Q9Y2H5 1048 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 CCL27Q9Y4X3 112 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 MED12Q93074 2177 aa12.29□□□□□ -0.44
CCHCR1-227ENST00000508852 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 MAP1AP78559 2803 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 MTORP42345 2549 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 EMC8O43402 210 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 NPHS1O60500 1241 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 TNFSF13O75888 250 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 UTS2O95399 124 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 FGF4P08620 206 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 HPGDP15428 266 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 KLK2P20151 261 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 SERPINB5P36952 375 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 HSPB3Q12988 150 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 GCNT2Q8N0V5 402 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 CNEP1R1Q8N9A8 125 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 GPR151Q8TDV0 419 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 ACTRT2Q8TDY3 377 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 HOXB13Q92826 284 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 ZBTB8AQ96BR9 441 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 MS4A4EQ96PG1 132 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 NEUROD4Q9HD90 331 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 GLRX2Q9NS18 164 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 GIN1Q9NXP7 522 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 MED11Q9P086 117 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 ZNF337Q9Y3M9 751 aa12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 PRRC2AP48634 2157 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-227ENST00000508852 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 OR2M5A3KFT3 312 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 ALG1L2C9J202 215 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 NDUFB5O43674 189 aa12.27□□□□□ -0.45
CCHCR1-227ENST00000508852 SMNDC1O75940 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms