RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 HBEGFQ99075 208 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 LPAR4Q99677 370 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 MRPL57Q9BQC6 102 aaKnown RBP4.2□□□□□ -1.74
NUP54-206ENST00000508465 CCDC77Q9BR77 488 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 UTP23Q9BRU9 249 aaKnown RBP4.2□□□□□ -1.74
NUP54-206ENST00000508465 TBCDQ9BTW9 1192 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 NPLQ9BXD5 320 aaPredicted RBP4.2□□□□□ -1.74
NUP54-206ENST00000508465 DEFB126Q9BYW3 111 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 SHCBP1LQ9BZQ2 653 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 MRPL46Q9H2W6 279 aaKnown RBP4.2□□□□□ -1.74
NUP54-206ENST00000508465 EPS8L2Q9H6S3 715 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 ANKZF1Q9H8Y5 726 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 COPS7BQ9H9Q2 264 aaPredicted RBP4.2□□□□□ -1.74
NUP54-206ENST00000508465 MMP25Q9NPA2 562 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 COPG2Q9UBF2 871 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 XPR1Q9UBH6 696 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 C19orf25Q9UFG5 118 aaPredicted RBP4.2□□□□□ -1.74
NUP54-206ENST00000508465 PCTPQ9UKL6 214 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 EMCNQ9ULC0 261 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 DAPP1Q9UN19 280 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 OSGIN2Q9Y236 505 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 ATG4BQ9Y4P1 393 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 CLDN16Q9Y5I7 305 aa4.2□□□□□ -1.74
NUP54-206ENST00000508465 RP1L1Q8IWN7 2480 aaPredicted RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 A0A088AWK7 358 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 IGKV3D-11A0A0A0MRZ8 115 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 TRAV17A0A0B4J275 112 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 IQANK1A0A1B0GTG1 560 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 OR5H15A6NDH6 313 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ANKUB1A6NFN9 424 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 GABRR3A8MPY1 467 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 E9PLN8 166 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 G3V3Y1 287 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 H0YIV9 168 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 H0YIZ8 118 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 WWP2O00308 870 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MANBAO00462 879 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 CLDN4O14493 209 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 PCDH17O14917 1159 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 TMPRSS11DO60235 418 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 FGF17O60258 216 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 PRAMEF2O60811 474 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 SUPT7LO94864 414 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 OR4F21O95013 312 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 DDAH2O95865 285 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 CHEK2O96017 543 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 PDYNP01213 254 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 SP1P08047 785 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 RNF224P0DH78 156 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 IMPDH1P20839 514 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ZNF10P21506 573 aaPredicted RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 CPN2P22792 545 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 JAK1P23458 1154 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 PCSK6P29122 969 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 BSGP35613 385 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 RFC3P40938 356 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 PIK3CBP42338 1070 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 NR0B1P51843 470 aaKnown RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 HNRNPH2P55795 449 aaKnown RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 HSD17B7P56937 341 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MLF1P58340 268 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 VSNL1P62760 191 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 BTKQ06187 659 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 STX4Q12846 297 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 IFT88Q13099 833 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 TRAF3Q13114 568 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 E2F2Q14209 437 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 OR1C1Q15619 314 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 TWIST1Q15672 202 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MAPKAPK3Q16644 382 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MEP1AQ16819 746 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ZNF766Q5HY98 468 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 FRG2Q64ET8 278 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 NIPAL1Q6NVV3 410 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 FAM180BQ6P0A1 224 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 CYP20A1Q6UW02 462 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 IL20RBQ6UXL0 311 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 QSOX2Q6ZRP7 698 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 SH2D5Q6ZV89 423 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 HPS6Q86YV9 775 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ZNF595Q8IYB9 648 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ANKRD42Q8N9B4 389 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MYRIPQ8NFW9 859 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 SUN3Q8TAQ9 357 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 WDR20Q8TBZ3 569 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 ELP5Q8TE02 316 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 PPP4R1Q8TF05 950 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 NCLNQ969V3 563 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MTBPQ96DY7 904 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 SENP5Q96HI0 755 aaPredicted RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 MARK4Q96L34 752 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 FRG2BQ96QU4 278 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 BARD1Q99728 777 aaKnown RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 VKORC1Q9BQB6 163 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 CNPPD1Q9BV87 410 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 MRPL1Q9BYD6 325 aaKnown RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 OR8D2Q9GZM6 311 aa4.19□□□□□ -1.74
NUP54-206ENST00000508465 RPF2Q9H7B2 306 aaKnown RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 CLK4Q9HAZ1 481 aaKnown RBP4.19□□□□□ -1.74
NUP54-206ENST00000508465 LYRM4Q9HD34 91 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms