RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MAGEA5P43359 124 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 UBE2HP62256 183 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 RPS27AP62979 156 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 EIF2B1Q14232 305 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 EXOC3L2Q2M3D2 409 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF699Q32M78 642 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 MS4A18Q3C1V0 323 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLX4IPQ5VYV7 408 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 TTC23Q5W5X9 447 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 NEPROQ6NW34 567 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC39A4Q6P5W5 647 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF841Q6ZN19 808 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 GDPGP1Q6ZNW5 385 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR4N5Q8IXE1 308 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 SPRYD4Q8WW59 207 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 LHX4Q969G2 390 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 MYLPFQ96A32 169 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 UPRTQ96BW1 309 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 CYYR1Q96J86 154 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 ALKBH3Q96Q83 286 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 CPXM1Q96SM3 734 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 SECISBP2Q96T21 854 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 EDEM2Q9BV94 578 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 GON7Q9BXV9 100 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 PKIBQ9C010 78 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 CALHM2Q9HA72 323 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 ELOVL3Q9HB03 270 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 FAM114A2Q9NRY5 505 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 DCAF13Q9NV06 445 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF346Q9UL40 294 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 DHRS7Q9Y394 339 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 CCDC7Q96M83 1385 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 PTPRUQ92729 1446 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 LRIT2A6NDA9 550 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 METTL21EPA6NDL7 271 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ACOD1A6NK06 481 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 LRRC30A6NM36 301 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 SNNO75324 88 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 WBP4O75554 376 aaKnown RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 IGSF6O95976 241 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 HSMCR30P0CW71 290 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 DBTP11182 482 aaKnown RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ANXA3P12429 323 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 HSD17B1P14061 328 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 HNF1AP20823 631 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 CCNCP24863 283 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 EDNRAP25101 427 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 PPP2R1BP30154 601 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 TDO2P48775 406 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ACADVLP49748 655 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 PPT1P50897 306 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ACTR3P61158 418 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 CUL2Q13617 745 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 FASTKQ14296 549 aaKnown RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 RCN1Q15293 331 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF562Q6V9R5 426 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 KIAA1328Q86T90 577 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC47A2Q86VL8 602 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 HPS6Q86YV9 775 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ABHD12Q8N2K0 398 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 UBE2J2Q8N2K1 259 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ANKFN1Q8N957 763 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 CHDHQ8NE62 594 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 STXBP6Q8NFX7 210 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR52K2Q8NGK3 314 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR1K1Q8NGR3 316 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 AKR7LQ8NHP1 331 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 OSTF1Q92882 214 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 ART4Q93070 314 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC25A36Q96CQ1 311 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 SDSLQ96GA7 329 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 RPRD1AQ96P16 312 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 OMDQ99983 421 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 CCDC77Q9BR77 488 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 OVOL2Q9BRP0 275 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 RNF41Q9H4P4 317 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 FNDC4Q9H6D8 234 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 HEXA-AS1Q9H8Q6 139 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 WDR41Q9HAD4 459 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 MEAF6Q9HAF1 191 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 TM9SF3Q9HD45 589 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 HYPKQ9NX55 129 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 MGAT4AQ9UM21 535 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 RNF6Q9Y252 685 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLCO1B1Q9Y6L6 691 aa3.34□□□□□ -1.87
TRAPPC13-209ENST00000508304 SYNJ2O15056 1496 aa3.34□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 XKRY2A2RUG3 117 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 IGLON5A6NGN9 336 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM74A7A6NL05 159 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 FBP2O00757 339 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 DUX1O43812 170 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 STX11O75558 287 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 PDE5AO76074 875 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 SERPINA3P01011 423 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 H2AFXP16104 143 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 UQCRC2P22695 453 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 TAGLN2P37802 199 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 NTHL1P78549 312 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms