RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 RPL15P61313 204 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 RPS13P62277 151 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 REEP5Q00765 189 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ACVR1Q04771 509 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 RGS1Q08116 209 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 STX4Q12846 297 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TBX2Q13207 712 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CDK5R2Q13319 367 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SPARCL1Q14515 664 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GANABQ14697 944 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 EFTUD2Q15029 972 aaKnown RBP eCLIP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MLC1Q15049 377 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PPP1R3AQ16821 1122 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MSMPQ1L6U9 139 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 KLHL38Q2WGJ6 581 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 DEFB112Q30KQ8 113 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ADPRMQ3LIE5 342 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NRN1LQ496H8 165 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TCTEX1D4Q5JR98 221 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TOR1AIP1Q5JTV8 583 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SH2D4BQ5SQS7 431 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 THEMIS2Q5TEJ8 643 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PGBD2Q6P3X8 592 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 AFTPHQ6ULP2 937 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CYHR1Q6ZMK1 362 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MBOAT1Q6ZNC8 495 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SSX8Q7RTT4 187 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SLC29A4Q7RTT9 530 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PID1Q7Z2X4 250 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PIWIL4Q7Z3Z4 852 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SPATA19Q7Z5L4 167 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 C17orf64Q86WR6 236 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 WDFY1Q8IWB7 410 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 REXO1L1PQ8IX06 675 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TUSC5Q8IXB3 177 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 KATNAL2Q8IYT4 538 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SAMD14Q8IZD0 417 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TAGAPQ8N103 731 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NKAPQ8N5F7 415 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF615Q8N8J6 731 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 C17orf47Q8NEP4 570 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 OR2M3Q8NG83 312 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 OR10D3Q8NH80 312 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 OR2W6PQ8NHA6 318 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GIMAP7Q8NHV1 300 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SLC35G2Q8TBE7 412 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SKA2Q8WVK7 121 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TFB1MQ8WVM0 346 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 JADE3Q92613 823 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 P3H4Q92791 437 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GFM2Q969S9 779 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GAL3ST3Q96A11 431 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MUCL1Q96DR8 90 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF778Q96MU6 729 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 FOPNLQ96NB1 174 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 QKIQ96PU8 341 aaKnown RBP eCLIP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CHP1Q99653 195 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 DESI2Q9BSY9 194 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 C1QTNF6Q9BXI9 259 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 RTN4RQ9BZR6 473 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 STMN4Q9H169 189 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NXF5Q9H1B4 397 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MMP28Q9H239 520 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC177Q9NQR7 707 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MMP26Q9NRE1 261 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CA10Q9NS85 328 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF275Q9NSD4 429 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TAS2R16Q9NYV7 291 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 KLHL8Q9P2G9 620 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 KLHL42Q9P2K6 505 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 KLHL13Q9P2N7 655 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PRODH2Q9UF12 536 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GRID1Q9ULK0 1009 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NENFQ9UMX5 172 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SOX13Q9UN79 622 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MED16Q9Y2X0 877 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 DNAH2Q9P225 4427 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 IGHV3OR16-10A0A075B7F0 116 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 hCG_1818297A0A087WSY0 165 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 A0A0J9YW62 118 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 A0A1W2PS29 197 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 LRIT2A6NDA9 550 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 WASHC1A8K0Z3 465 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 BTNL10A8MVZ5 291 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CAPN14A8MX76 684 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 HACD1B0YJ81 288 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 SHISA8B8ZZ34 492 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 TRAPPC2LH3BP13 241 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 H7C0C1 242 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CXCL13O43927 109 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GPR137BO60478 399 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CST8O60676 142 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 RAD51DO75771 328 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 GAS8O95995 478 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CATP04040 527 aaKnown RBP2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CRYBA1P05813 215 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 CT62P0C5K7 136 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 MED14OSP0DP75 135 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 ANPEPP15144 967 aa2.84□□□□□ -1.95
TCOF1-208ENST00000506063 NAGAP17050 411 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms