RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 Q9N2J8 555 aa20.48■□□□□ 0.87
CDC42SE2-207ENST00000504701 GALNT8Q9NY28 637 aa20.48■□□□□ 0.87
CDC42SE2-207ENST00000504701 PLEKHA6Q9Y2H5 1048 aa20.48■□□□□ 0.87
CDC42SE2-207ENST00000504701 MRPS18CQ9Y3D5 142 aaKnown RBP20.48■□□□□ 0.87
CDC42SE2-207ENST00000504701 TUBAL3A6NHL2 446 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 PIP5K1BO14986 540 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 SLITRK5O94991 958 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 UTS2O95399 124 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 IL18BPO95998 194 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 ACP2P11117 423 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 CHMP24386 653 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 SUCLG1P53597 346 aaKnown RBP20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 PRKAG1P54619 331 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 ARL13AQ5H913 290 aaPredicted RBP20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 RAET1LQ5VY80 246 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 GRAMD2AQ8IUY3 354 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 FAM222BQ8WU58 562 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 TWIST2Q8WVJ9 160 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 WNT2BQ93097 391 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 UCN2Q96RP3 112 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 NPAS1Q99742 590 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 CCT7Q99832 543 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 RBM24Q9BX46 236 aaKnown RBP20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 REEP4Q9H6H4 257 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 FBXO34Q9NWN3 711 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 MKS1Q9NXB0 559 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 SH3BP4Q9P0V3 963 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 WBP11Q9Y2W2 641 aaKnown RBP20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 ZNF337Q9Y3M9 751 aa20.47■□□□□ 0.87
CDC42SE2-207ENST00000504701 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 HCRTR2O43614 444 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 TNFSF13O75888 250 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 GPC1P35052 558 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 MAP3K8P41279 467 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 PSPHP78330 225 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 MRPS22P82650 360 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 PDE7AQ13946 482 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 SZRD1Q7Z422 152 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 DDIASQ8IXT1 998 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 CNPY4Q8N129 248 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 FIG4Q92562 907 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 PPCDCQ96CD2 204 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 TM9SF2Q99805 663 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 YIPF4Q9BSR8 244 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 SFXN3Q9BWM7 321 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 FAM120CQ9NX05 1096 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 ST6GALNAC2Q9UJ37 374 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 ABCG2Q9UNQ0 655 aa20.46■□□□□ 0.87
CDC42SE2-207ENST00000504701 OR2M5A3KFT3 312 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 SEC14L5O43304 696 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 PRPS2P11908 318 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 BCKDHAP12694 445 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 FRKP42685 505 aaPredicted RBP20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 CLDN20P56880 219 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 POU4F3Q15319 338 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 ZNHIT3Q15649 155 aaPredicted RBP20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 VWA1Q6PCB0 445 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 RNF165Q6ZSG1 346 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 GATSQ8NAP1 163 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 NUP43Q8NFH3 380 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 TCP10LQ8TDR4 215 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 GPR151Q8TDV0 419 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 SLC9A6Q92581 669 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 HOXB13Q92826 284 aaPredicted RBP20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 C1GALT1C1Q96EU7 318 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 LRRC46Q96FV0 321 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 C16orf58Q96GQ5 468 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 ZNF845Q96IR2 970 aaPredicted RBP20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 METTL2AQ96IZ6 378 aaKnown RBP20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 C3orf30Q96M34 536 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 FOXD3Q9UJU5 478 aaPredicted RBP20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 MID2Q9UJV3 735 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 TRAF6Q9Y4K3 522 aa20.45■□□□□ 0.86
CDC42SE2-207ENST00000504701 A0A1W2PNV4 684 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 A0A1W2PPR1 153 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 H3BML4 177 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 NUDT17P0C025 328 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 EPXP11678 715 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 NEFHP12036 1026 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 FIGNL1Q6PIW4 674 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 SLC16A11Q8NCK7 471 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 OR7A2PQ8NGA2 310 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 SMPDL3BQ92485 455 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 ZBTB9Q96C00 473 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 TRMOQ9BU70 441 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 IQCGQ9H095 443 aaKnown RBP20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 SIRT3Q9NTG7 399 aaPredicted RBP20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 LGALS13Q9UHV8 139 aa20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 V9GYY5 206 aaPredicted RBP20.44■□□□□ 0.86
CDC42SE2-207ENST00000504701 NPHS1O60500 1241 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 TBX19O60806 448 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 NKX2-2O95096 273 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 ANGPTL1O95841 491 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 CPA2P48052 419 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 MANFP55145 182 aaKnown RBP20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 DAZAP2Q15038 168 aaPredicted RBP20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 DUSP5Q16690 384 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 CCNJQ5T5M9 372 aa20.43■□□□□ 0.86
CDC42SE2-207ENST00000504701 OR4C3Q8NH37 302 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms