RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TNNI3P19429 210 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 PRKAR1BP31321 381 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 VHLP40337 213 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 PPICP45877 212 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 OR1E2P47887 323 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 LIMS1P48059 325 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 NOVA1P51513 510 aaKnown RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 IST1P53990 364 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 TRIP10Q15642 601 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ATAD3BQ5T9A4 648 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 FNDC7Q5VTL7 733 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 TBPL2Q6SJ96 375 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 DTX1Q86Y01 620 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 CLIP4Q8N3C7 705 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 BCORP1Q8N888 145 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 C17orf47Q8NEP4 570 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 OR4C15Q8NGM1 316 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 GPR151Q8TDV0 419 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ELP5Q8TE02 316 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 RNF138Q8WVD3 245 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 GEMIN6Q8WXD5 167 aaKnown RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 CENPNQ96H22 339 aaPredicted RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 TPD52L3Q96J77 140 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ART5Q96L15 291 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ZNF354BQ96LW1 612 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 BARD1Q99728 777 aaKnown RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 FUZQ9BT04 418 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ZNF700Q9H0M5 742 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 POLE3Q9NRF9 147 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ADPRHL2Q9NX46 363 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 DNAJB9Q9UBS3 223 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 PRODH2Q9UF12 536 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ACAD8Q9UKU7 415 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 ZNF443Q9Y2A4 671 aaPredicted RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 PTRH2Q9Y3E5 179 aaKnown RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 WDR45Q9Y484 360 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 MAGED1Q9Y5V3 778 aaPredicted RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 CLCA3PQ9Y6N3 262 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 NINQ8N4C6 2090 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 CPAMD8Q8IZJ3 1885 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 KNTC1P50748 2209 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 LOC101059948A0A1B0GTJ6 334 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 SAC3D1A6NKF1 404 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 J3KTA2 159 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 M0R3H8 397 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 SOCS2O14508 198 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 TSPAN2O60636 221 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 RAD1O60671 282 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ADAM11O75078 769 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 STX11O75558 287 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 DNAJB5O75953 348 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 IL33O95760 270 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 LDLRP01130 860 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ALPPP05187 535 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 THBS1P07996 1170 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 DRD5P21918 477 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ZNF136P52737 540 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 RNF4P78317 190 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 GABREP78334 506 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 IL10RAQ13651 578 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 GNA13Q14344 377 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ZNF141Q15928 474 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ANKRD34AQ69YU3 496 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 TCTN3Q6NUS6 607 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 KIRREL2Q6UWL6 708 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 CARM1Q86X55 608 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 HS3ST5Q8IZT8 346 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 OR11G2Q8NGC1 345 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ADAMTS17Q8TE56 1095 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 TMBIM1Q969X1 311 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
TPM3-217ENST00000504663 LCORQ96JN0 433 aaPredicted RBP9.59□□□□□ -0.87
TPM3-217ENST00000504663 ZNF300Q96RE9 604 aaPredicted RBP9.59□□□□□ -0.87
TPM3-217ENST00000504663 ZNF607Q96SK3 696 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 PINK1Q9BXM7 581 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 POLR1BQ9H9Y6 1135 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 CALML5Q9NZT1 146 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 SEC14L3Q9UDX4 400 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 TCFL5Q9UL49 500 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 PADI1Q9ULC6 663 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 CBLCQ9ULV8 474 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 OAZ3Q9UMX2 235 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 ENPP4Q9Y6X5 453 aa9.59□□□□□ -0.87
TPM3-217ENST00000504663 DCHS1Q96JQ0 3298 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 C7orf72A4D263 438 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 PDLIM1O00151 329 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 MASP2O00187 686 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 FRS3O43559 492 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 LYPD3O95274 346 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 THY1P04216 161 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 HOXB6P17509 224 aaKnown RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 MMP11P24347 488 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 DCTP40126 519 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 RNF144AP50876 292 aaPredicted RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 AQP4P55087 323 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 PPP1R8Q12972 351 aaKnown RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 DNASE1L3Q13609 305 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms