RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 BEND6Q5SZJ8 279 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 C1orf220Q5T0J3 134 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 ALKBH5Q6P6C2 394 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 H2AFVQ71UI9 128 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 KCTD9Q7L273 389 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 RPAINQ86UA6 219 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 SYCE1Q8N0S2 351 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 CSNK1G2-AS1Q8NCQ2 148 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 SPATA18Q8TC71 538 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 GANCQ8TET4 914 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 ULK4Q96C45 1275 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 CEP170P1Q96L14 293 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 IFT74Q96LB3 600 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 SSX3Q99909 188 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 DHX33Q9H6R0 707 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 UBE2TQ9NPD8 197 aaPredicted RBP4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 ZNF302Q9NR11 478 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 NRBP2Q9NSY0 501 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 SPATA2Q9UM82 520 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 SH3GLB1Q9Y371 365 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 STYXL1Q9Y6J8 313 aa4.66□□□□□ -1.66
UBE2D3-217ENST00000504211 IGHV3-16A0A0C4DH30 117 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 GSTTP1A0A1W2PQM5 241 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 TMEM129A0AVI4 362 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 CCDC169A6NNP5 214 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 CHUKO15111 745 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 PALMO75781 387 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 GZMAP12544 262 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 ADSSP30520 456 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SERPINB6P35237 376 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 ARL2P36404 184 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 NAMPTP43490 491 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 CBX1P83916 185 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 PRKCEQ02156 737 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SPHARQ15513 63 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SNRNP35Q16560 246 aaKnown RBP4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 ECSCRQ19T08 205 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 C9orf66Q5T8R8 295 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 KCTD11Q693B1 232 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 CAPN13Q6MZZ7 669 aaPredicted RBP4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 TIPARPQ7Z3E1 657 aaKnown RBP4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SLC25A42Q86VD7 318 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 P2RY8Q86VZ1 359 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 C17orf64Q86WR6 236 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 FAM71AQ8IYT1 594 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 GPD1LQ8N335 351 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 EIF1ADQ8N9N8 165 aaKnown RBP4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 CLEC1AQ8NC01 280 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SPATA4Q8NEY3 305 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 OR1B1Q8NGR6 318 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 ACTRT1Q8TDG2 376 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 PTP4A1Q93096 173 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 TOMM40LQ969M1 308 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 ATP6V1E2Q96A05 226 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 C1orf147Q96MC9 270 aaPredicted RBP4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 GUCD1Q96NT3 240 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 TNFRSF13CQ96RJ3 184 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 AGPAT1Q99943 283 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 CBWD1Q9BRT8 395 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 DCTN5Q9BTE1 182 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 TMEM117Q9H0C3 514 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 PORCNQ9H237 461 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 XPNPEP1Q9NQW7 623 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SPG21Q9NZD8 308 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 PSORS1C1Q9UIG5 152 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 ERVK-19Q9WJR5 959 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.67
UBE2D3-217ENST00000504211 A0A0A6YYC8 382 aaPredicted RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 A0A0U1RQG5 324 aaPredicted RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 TMEM150BA6NC51 233 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 OR5H15A6NDH6 313 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 ZNF233A6NK53 670 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 LRRIQ3A6PVS8 624 aaPredicted RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 ANKRD63C9JTQ0 380 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 I3L1I5 382 aaPredicted RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 K7ERI5 159 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 BUB1O43683 1085 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 RTN2O75298 545 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 CNMDO75829 334 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 RHOXF2BP0C7M4 288 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 GLRA1P23415 457 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 GCLMP48507 274 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 GSK3BP49841 420 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 SLC26A2P50443 739 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 TNFSF10P50591 281 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 AP3M2P53677 418 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 VSNL1P62760 191 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 IRX3P78415 501 aaPredicted RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 CNTN2Q02246 1040 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 ACY1Q03154 408 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 ZFP36L1Q07352 338 aaKnown RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 CYP24A1Q07973 514 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 FASTKQ14296 549 aaKnown RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 SMC1AQ14683 1233 aaKnown RBP4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 EMC2Q15006 297 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 RPS6KA1Q15418 735 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 HIGD2BQ4VC39 106 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 PPP1R2P3Q6NXS1 205 aa4.64□□□□□ -1.67
UBE2D3-217ENST00000504211 SLC39A4Q6P5W5 647 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms