RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 OR7G1Q8NGA0 311 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 BAHD1Q8TBE0 780 aaPredicted RBP10.84□□□□□ -0.67
USP46-204ENST00000503060 KAT2AQ92830 837 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 OR7D2Q96RA2 312 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 TRIM2Q9C040 744 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 ENOPH1Q9UHY7 261 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 HEMK1Q9Y5R4 338 aaPredicted RBP10.84□□□□□ -0.67
USP46-204ENST00000503060 DMRT1Q9Y5R6 373 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 KCNE3Q9Y6H6 103 aa10.84□□□□□ -0.67
USP46-204ENST00000503060 CCDC88CQ9P219 2028 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 A0A0J9YY10 115 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 A0A1W2PPH5 198 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 FAM227AF5H4B4 570 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 TMX2-CTNND1H3BSU7 103 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 M6PRP20645 277 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ELAVL4P26378 380 aaKnown RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 MAP2K4P45985 399 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 C1orf61Q13536 156 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 GPAT3Q53EU6 434 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 FGD3Q5JSP0 725 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RNF44Q7L0R7 432 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ABHD13Q7L211 337 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 LRRC25Q8N386 305 aaPredicted RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 TSTD1Q8NFU3 115 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RHOXF1Q8NHV9 184 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RAB2BQ8WUD1 216 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RSC1A1Q92681 617 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RERGQ96A58 199 aaPredicted RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 KLHDC7BQ96G42 594 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 CSF3RQ99062 836 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ORAI3Q9BRQ5 295 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 BTBD2Q9BX70 525 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 UBE2ZQ9H832 354 aaPredicted RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 ANKRA2Q9H9E1 313 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 EQTNQ9NQ60 294 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 WARS2Q9UGM6 360 aaKnown RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 DAPP1Q9UN19 280 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 PCDHGA1Q9Y5H4 931 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 SLCO1B1Q9Y6L6 691 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 FAAHO00519 579 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ASNA1O43681 348 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 DNAJB6O75190 326 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 CCNA2P20248 432 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ZNF10P21506 573 aaPredicted RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 PTBP1P26599 531 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP46-204ENST00000503060 TRHRP34981 398 aaPredicted RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 IDH2P48735 452 aaKnown RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 DHPSP49366 369 aaPredicted RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 XKP51811 444 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 SMIM11AP58511 58 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 SEC23BQ15437 767 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 DCST1Q5T197 706 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 FAM122CQ6P4D5 195 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 DHRS4L2Q6PKH6 230 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 KLHL17Q6TDP4 642 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 SVOPQ8N4V2 548 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 OR4K14Q8NGD5 310 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 POC1BQ8TC44 478 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RLN3Q8WXF3 142 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 RORBQ92753 470 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 FKBP10Q96AY3 582 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 SLC6A18Q96N87 628 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 SIGLEC11Q96RL6 698 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ACTRT3Q9BYD9 372 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 LMAN1LQ9HAT1 526 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 PLCXD1Q9NUJ7 323 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 ZNF226Q9NYT6 803 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 TAS2R3Q9NYW6 316 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 FTSJ1Q9UET6 329 aa10.83□□□□□ -0.68
USP46-204ENST00000503060 MRPS2Q9Y399 296 aaKnown RBP10.83□□□□□ -0.68
USP46-204ENST00000503060 SPTBN5Q9NRC6 3674 aaKnown RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 SCN3AQ9NY46 2000 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 A6NLC8 198 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 OXSR1O95747 527 aaPredicted RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 EPPINO95925 133 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 LGI1O95970 557 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 ADAP00813 363 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 EIF2S1P05198 315 aaKnown RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 TLX1P31314 330 aaPredicted RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 BMI1P35226 326 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 SIM1P81133 766 aaPredicted RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 TEKQ02763 1124 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 LGALS3BPQ08380 585 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 MLIPQ5VWP3 458 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 PRSS48Q7RTY5 328 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 HMGN2P46Q86SG4 172 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 ZNF761Q86XN6 746 aaPredicted RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 CCDC103Q8IW40 242 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 ZNF687Q8N1G0 1237 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 FAM160A2Q8N612 972 aaPredicted RBP10.82□□□□□ -0.68
USP46-204ENST00000503060 FUZQ9BT04 418 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 FUNDC2Q9BWH2 189 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 PRDM9Q9NQV7 894 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 TMEM74BQ9NUR3 256 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 MS4A12Q9NXJ0 267 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 NTMQ9P121 344 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 A4GNTQ9UNA3 340 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 MGAT4BQ9UQ53 548 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 GAB2Q9UQC2 676 aa10.82□□□□□ -0.68
USP46-204ENST00000503060 LIPT1Q9Y234 373 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms