RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 MAPK3P27361 379 aaPredicted RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 NMBRP28336 390 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CCR1P32246 355 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CAP2P40123 477 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 MAGEA12P43365 314 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 RPS10P46783 165 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 EVX1P49640 407 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CXCR3P49682 368 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 RABGGTBP53611 331 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 HCCSP53701 268 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ITGA1P56199 1179 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 YBEYP58557 167 aaPredicted RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 RPS25P62851 125 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 FAM189BP81408 668 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SEMG2Q02383 582 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 RCAN2Q14206 197 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 INSL4Q14641 139 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SV2CQ496J9 727 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 LRRC37A5PQ49AS3 106 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SEZ6Q53EL9 994 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SPIN4Q56A73 249 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 UBXN11Q5T124 520 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 FAM102BQ5T8I3 360 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 OVOS1Q6IE37 1185 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 FBXO42Q6P3S6 717 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ZC3H14Q6PJT7 736 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 MEX3BQ6ZN04 569 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 NUP54Q7Z3B4 507 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 GPR135Q8IZ08 494 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ARMC10Q8N2F6 343 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 PYROXD2Q8N2H3 581 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 STK40Q8N2I9 435 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 FAM46DQ8NEK8 389 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 EXTL1Q92935 676 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 FAM120BQ96EK7 910 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 SCLYQ96I15 445 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 MSLNLQ96KJ4 702 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CNTNAP3BQ96NU0 1288 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ZNF385AQ96PM9 386 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 MTERF1Q99551 399 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 RAD9AQ99638 391 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 PITX2Q99697 317 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 HSD17B14Q9BPX1 270 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SNHG12Q9BXW3 62 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 BRINP2Q9C0B6 783 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 DUSP15Q9H1R2 295 aaPredicted RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 EPHX3Q9H6B9 360 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 TPT1P8Q9HAU6 139 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 APOBEC3GQ9HC16 384 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 IMP3Q9NV31 184 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 RNF19AQ9NV58 838 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 WRAP73Q9P2S5 460 aaPredicted RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 IL20RAQ9UHF4 553 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 GDF2Q9UK05 429 aaPredicted RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 DLEC1Q9Y238 1755 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 A0A1B0GTL3 188 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 C2orf92A0A1B0GVN3 265 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 OR14I1A6ND48 311 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 IFITM10A6NMD0 228 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 GFYI3L273 518 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 J3KR12 359 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SGK494L7N484 410 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 OR7A17O14581 309 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 HNRNPDLO14979 420 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 ARPC1BO15143 372 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 RGS14O43566 566 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 OR10H3O60404 316 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 VAMP5O95183 116 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 IGHV2-5P01817 119 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 IGHEP01854 428 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SCG5P05408 212 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CLTBP09497 229 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 PKMP14618 531 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 ABOP16442 354 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 FPR1P21462 350 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 AHCYP23526 432 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CYP2F1P24903 491 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 PTPN3P26045 913 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 AQP1P29972 269 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 DNAJA1P31689 397 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 BTCP35070 178 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 APLNRP35414 380 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 STK19P49842 368 aaPredicted RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 ATP4BP51164 291 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SORDQ00796 357 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 C1DQ13901 141 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 MEF2DQ14814 521 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 UBXN2BQ14CS0 331 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 SF1Q15637 639 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 ELAVL1Q15717 326 aaKnown RBP3.8□□□□□ -1.8
ATG3-207ENST00000494571 C3orf38Q5JPI3 329 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 TMEM255AQ5JRV8 349 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ATAT1Q5SQI0 421 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 NCR3LG1Q68D85 454 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 OR2A2Q6IF42 318 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ZNF529Q6P280 563 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 ZNF730Q6ZMV8 503 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 PTCHD4Q6ZW05 846 aa3.8□□□□□ -1.8
ATG3-207ENST00000494571 CAMKMTQ7Z624 323 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms