RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 FIS1Q9Y3D6 152 aa12.13□□□□□ -0.47
CTDSP1-212ENST00000494067 UQCRHLA0A096LP55 91 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 GXYLT2A0PJZ3 443 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 FAM221AA4D161 298 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 IGKV1D-16P01601 117 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CRHP06850 196 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 IFI6P09912 130 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 NEFHP12036 1026 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CD99P14209 185 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CREB1P16220 341 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 SDC1P18827 310 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 PRPH2P23942 346 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CLDN15P56746 228 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CLDN18P56856 261 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 VSNL1P62760 191 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 KEAP1Q14145 624 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 ZNF551Q7Z340 670 aaPredicted RBP12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 UBQLNLQ8IYU4 475 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 OR2L13Q8N349 312 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 FADS6Q8N9I5 356 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CEP70Q8NHQ1 597 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 ELP4Q96EB1 424 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 DACH2Q96NX9 599 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 KLHDC3Q9BQ90 382 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 TRMOQ9BU70 441 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 DSN1Q9H410 356 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 LRTM1Q9HBL6 345 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 C1orf109Q9NX04 203 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 VPS13CQ709C8 3753 aa12.12□□□□□ -0.47
CTDSP1-212ENST00000494067 MED12LQ86YW9 2145 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 F8P00451 2351 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 SLC22A20A6NK97 555 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 H0YC42 278 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 PDPK1O15530 556 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 FADS1O60427 444 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.473e-7■■■■■ 27.2
CTDSP1-212ENST00000494067 IL33O95760 270 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 RAF1P04049 648 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 PRPS2P11908 318 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 GABRA3P34903 492 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 PRKAG1P54619 331 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 TPD52P55327 224 aaPredicted RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 RPS3AP61247 264 aaKnown RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 C17orf67Q0P5P2 114 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 HSPB3Q12988 150 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 STX5Q13190 355 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 UGT3A2Q3SY77 523 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 GLYR1Q49A26 553 aaPredicted RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 RFTN2Q52LD8 501 aaPredicted RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 KANK2Q63ZY3 851 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 APOOLQ6UXV4 268 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 SZRD1Q7Z422 152 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 TRABD2AQ86V40 505 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 BANPQ8N9N5 519 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 OR2M3Q8NG83 312 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 CLHC1Q8NHS4 586 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 GPR151Q8TDV0 419 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 PPCDCQ96CD2 204 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 ZBED6CLQ96FA7 236 aaPredicted RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 EML4Q9HC35 981 aaKnown RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 FAM120CQ9NX05 1096 aaKnown RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 GALNT8Q9NY28 637 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 MED11Q9P086 117 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 SH3BP4Q9P0V3 963 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 EIF3LQ9Y262 564 aaKnown RBP12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 DNAJC15Q9Y5T4 150 aa12.11□□□□□ -0.47
CTDSP1-212ENST00000494067 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 SH3D21A4FU49 640 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 A8MXE2 369 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 H3BML4 177 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 MSTNO14793 375 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 AZIN1O14977 448 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 LSM1O15116 133 aaKnown RBP12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 AKAP10O43572 662 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 TRIM13O60858 407 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 SPAG7O75391 227 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 TNFRSF21O75509 655 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 TGM6O95932 706 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 LINC00032P0C843 101 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 HPGDP15428 266 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 EFNA1P20827 205 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 CPOXP36551 454 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 MAP3K8P41279 467 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 MANFP55145 182 aaKnown RBP12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 FGFBP1Q14512 234 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 SGCBQ16585 318 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 ZAR1Q86SH2 424 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 GALNT10Q86SR1 603 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 CNEP1R1Q8N9A8 125 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 CDRT4Q8N9R6 151 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms