RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 PGCP20142 388 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 LAP3P28838 519 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 FCGR2CP31995 323 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 CAPGP40121 348 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SSR1P43307 286 aaKnown RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 CCT3P49368 545 aaKnown RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 EMDP50402 254 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 BST1Q10588 318 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ARHGAP19Q14CB8 494 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ATXN7L3Q14CW9 347 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 MAPK6Q16659 721 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 CTSL3PQ5NE16 218 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 C10orf120Q5SQS8 335 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 CELF3Q5SZQ8 465 aaKnown RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SLC35E4Q6ICL7 350 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 FAM71F2Q6NXP2 309 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 FIP1L1Q6UN15 594 aaKnown RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 C9orf139Q6ZV77 190 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SH2D5Q6ZV89 423 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 C1QL2Q7Z5L3 287 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 PAQR7Q86WK9 346 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 LRRC43Q8N309 656 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 OR4D5Q8NGN0 318 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 OR1K1Q8NGR3 316 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 OR4F5Q8NH21 305 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 MIPOL1Q8TD10 442 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SMAP2Q8WU79 429 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 LHX4Q969G2 390 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 AMDHD1Q96NU7 426 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 RPRD1AQ96P16 312 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ALKBH3Q96Q83 286 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 TUBGCP2Q9BSJ2 902 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 FUCA2Q9BTY2 467 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 GPR174Q9BXC1 333 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 FAM192AQ9GZU8 254 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 POLR3FQ9H1D9 316 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 MRPL39Q9NYK5 338 aaKnown RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SUN2Q9UH99 717 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 PCSK1NQ9UHG2 260 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 NPIPA1Q9UND3 350 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 TCF19Q9Y242 345 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 MROH1Q8NDA8 1641 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ABCC3O15438 1527 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SRCAPQ6ZRS2 3230 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ERVK-7P63135 1459 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 CAMSAP2Q08AD1 1489 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 NCOA2Q15596 1464 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ARHGAP23Q9P227 1491 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 FAM135BQ49AJ0 1406 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 UBR1Q8IWV7 1749 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 GRIN2DO15399 1336 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 A0A1W2PR80 420 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 GLTPD2A6NH11 291 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 C15orf61A6NNL5 157 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 SMIM1B2RUZ4 78 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 OR7A17O14581 309 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 DNALI1O14645 258 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 TM9SF1O15321 606 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 FGF17O60258 216 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 STX11O75558 287 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 CTAG2O75638 210 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 B3GAT3O94766 335 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 TSPAN12O95859 305 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 IGF1P05019 195 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 F7P08709 466 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ERVK-10P10266 1014 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 FGF3P11487 239 aaPredicted RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 BCKDHAP12694 445 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ANXA8P13928 327 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 CASQ1P31415 396 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 CDKN2AP42771 156 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 TSFMP43897 325 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 FNTAP49354 379 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 PAX9P55771 341 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 RAG2P55895 527 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ERVK-16P61578 105 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 PPP1R7Q15435 360 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 SNAI3Q3KNW1 292 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 BCL7AQ4VC05 210 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ANXA8L1Q5VT79 327 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 CARD17Q5XLA6 110 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 BHLHB9Q6PI77 547 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 DOK6Q6PKX4 331 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 PRSS57Q6UWY2 283 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 BTNL3Q6UXE8 466 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 MOB2Q70IA6 237 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ECHDC2Q86YB7 292 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 SLC38A6Q8IZM9 456 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 TMEM123Q8N131 208 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 GPR137CQ8N3F9 429 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ARL14Q8N4G2 192 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 BBOF1Q8ND07 529 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 ART4Q93070 314 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 NSMCE3Q96MG7 304 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 CHRDL1Q9BU40 450 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 RPP25Q9BUL9 199 aaKnown RBP3.79□□□□□ -1.8
GTF3A-208ENST00000493903 NUP58Q9BVL2 599 aa3.79□□□□□ -1.8
GTF3A-208ENST00000493903 PARD6BQ9BYG5 372 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms