RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SYPL1Q16563 259 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF628Q5EBL2 1059 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF542PQ5EBM4 170 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 TSEN54Q7Z6J9 526 aaKnown RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 RANBP3LQ86VV4 465 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CLVS1Q8IUQ0 354 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 SPARTQ8N0X7 666 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OR4N4Q8N0Y3 316 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CA13Q8N1Q1 262 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 BPIFB6Q8NFQ5 453 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 GPR32P1Q8NGA4 272 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OR13F1Q8NGS4 319 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 RHOXF1Q8NHV9 184 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 RLN3Q8WXF3 142 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 KLHL6Q8WZ60 621 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CDX2Q99626 313 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 RACGAP1Q9H0H5 632 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 SERHL2Q9H4I8 314 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 IL21RQ9HBE5 538 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 SIT1Q9Y3P8 196 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 WDR45Q9Y484 360 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 KNL1Q8NG31 2342 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 SH3PXD2BA1X283 911 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 FITM1A5D6W6 292 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 HTR3EA5X5Y0 456 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 SLC9B1P1A6NJY1 282 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 H3BS24 57 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 H3BSA7 217 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 TOX3O15405 576 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 DUX1O43812 170 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 OR10H3O60404 316 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 FAM20BO75063 409 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 NME6O75414 186 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 PIAS2O75928 621 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 MSL3P1P0C860 447 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 C8orf89P0DMQ9 161 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ST6GAL1P15907 406 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 TYRP1P17643 537 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 NT5EP21589 574 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ELK4P28324 431 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 CRISP1P54107 249 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 SNRPGP62308 76 aaKnown RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 PSPHP78330 225 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 SLC35A2P78381 396 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 SIM1P81133 766 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 STX4Q12846 297 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 PPP1R8Q12972 351 aaKnown RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 DUSP8Q13202 625 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 RAB39AQ14964 217 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 MEDAGQ5VYS4 303 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 FRMPD2BQ6IN97 320 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF770Q6IQ21 691 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 CASP12Q6UXS9 341 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 DEF8Q6ZN54 512 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 LINC00299Q6ZSB3 139 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 REC114Q7Z4M0 266 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 RABEPKQ7Z6M1 372 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 COX18Q8N8Q8 333 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 AQP11Q8NBQ7 271 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF540Q8NDQ6 660 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 OR5D16Q8NGK9 328 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 OR52P1PQ8NH57 321 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 OR52J3Q8NH60 311 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 PATE1Q8WXA2 126 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ISOC1Q96CN7 298 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 NMD3Q96D46 503 aaKnown RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 RBM18Q96H35 190 aaKnown RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 AHCYL2Q96HN2 611 aaKnown RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ARHGDIGQ99819 225 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 DPYSL5Q9BPU6 564 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 SLC38A1Q9H2H9 487 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 FANCEQ9HB96 536 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 MMACHCQ9Y4U1 282 aa9.34□□□□□ -0.91
PRPF3-206ENST00000493553 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
PRPF3-206ENST00000493553 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 A0A1B0GTW7 788 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ZAR1LA6NP61 321 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CLCA1A8K7I4 914 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF99A8MXY4 864 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PTGES3LE9PB15 166 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CHST10O43529 356 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 OR6B1O95007 311 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 HTR3BO95264 441 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 STATHP02808 62 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 WNT1P04628 370 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CHRM4P08173 479 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ALPPL2P10696 532 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PIPP12273 146 aaPredicted RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CYP4B1P13584 511 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PVRP15151 417 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 IL7RP16871 459 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 ELAVL4P26378 380 aaKnown RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CALRP27797 417 aaKnown RBP9.33□□□□□ -0.92
PRPF3-206ENST00000493553 LCN1P31025 176 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 CTSKP43235 329 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 LSSP48449 732 aa9.33□□□□□ -0.92
PRPF3-206ENST00000493553 PPM1FP49593 454 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms