RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 RCAN2Q14206 197 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 CPTPQ5TA50 214 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 NSUN5P2Q63ZY6 315 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 MFSD12Q6NUT3 480 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 ENPP6Q6UWR7 440 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 FADS6Q8N9I5 356 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 NAXEQ8NCW5 288 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 FAM120BQ96EK7 910 aaKnown RBP17.94■□□□□ 0.46
SMC4-222ENST00000490207 PPP1R36Q96LQ0 422 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 SFXN2Q96NB2 322 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 SDHAF3Q9NRP4 125 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 SIRT3Q9NTG7 399 aaPredicted RBP17.94■□□□□ 0.46
SMC4-222ENST00000490207 ATAD3AQ9NVI7 634 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 ABCA12Q86UK0 2595 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 DOCK7Q96N67 2140 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 DCHS2Q6V1P9 2916 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 A0A1W2PRB8 838 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 CD8B2A6NJW9 211 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 SNUPNO95149 360 aaKnown RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 UTS2O95399 124 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 IL2RAP01589 272 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 IGKV1D-16P01601 117 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 CEACAM8P31997 349 aaPredicted RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 TIMP3P35625 211 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 MAP3K8P41279 467 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 SLC1A6P48664 564 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 GFRA1P56159 465 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 DSCR4P56555 118 aaPredicted RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 PRR5P85299 388 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 MPP2Q14168 576 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 AAGABQ6PD74 315 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 TRIM42Q8IWZ5 723 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 KRTCAP2Q8N6L1 136 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 NATD1Q8N6N6 113 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 RELL2Q8NC24 303 aaPredicted RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 OR2M3Q8NG83 312 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 C14orf79Q96F83 325 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 SORT1Q99523 831 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 TBL1XR1Q9BZK7 514 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 DSN1Q9H410 356 aa17.93■□□□□ 0.46
SMC4-222ENST00000490207 ZCCHC3Q9NUD5 404 aaKnown RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 NOP53Q9NZM5 478 aaKnown RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 RPH3AQ9Y2J0 694 aaPredicted RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 MRPS18CQ9Y3D5 142 aaKnown RBP17.93■□□□□ 0.46
SMC4-222ENST00000490207 MBD3L4A6NDZ8 208 aaPredicted RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 MBD3L3A6NE82 208 aaPredicted RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 MBD3L5A6NJ08 208 aaPredicted RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 DVL2O14641 736 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 ERLIN1O75477 346 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 ALOX5P09917 674 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 G6PDP11413 515 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 CPN1P15169 458 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 PRPS1L1P21108 318 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 PRIM2P49643 509 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 SRYQ05066 204 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 GANABQ14697 944 aaKnown RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 DUSP5Q16690 384 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 SMU1Q2TAY7 513 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 GRAMD1BQ3KR37 738 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 ZCCHC12Q6PEW1 402 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 DMRTC2Q8IXT2 367 aaPredicted RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 KIRREL3Q8IZU9 778 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 COX18Q8N8Q8 333 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 ANKRD42Q8N9B4 389 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 SLC16A11Q8NCK7 471 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 MBD3L2Q8NHZ7 208 aaPredicted RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 ZPLD1Q8TCW7 415 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 OR5P2Q8WZ92 322 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 JADE3Q92613 823 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 PRPF18Q99633 342 aaKnown RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 PAIP2Q9BPZ3 127 aaKnown RBP17.92■□□□□ 0.46
SMC4-222ENST00000490207 TUBA1CQ9BQE3 449 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 YIPF4Q9BSR8 244 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 RTN4RQ9BZR6 473 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 C20orf27Q9GZN8 174 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 ASIC5Q9NY37 505 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 SNX8Q9Y5X2 465 aa17.92■□□□□ 0.46
SMC4-222ENST00000490207 BMP5P22003 454 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 CHMP24386 653 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 LHX2P50458 406 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 RPL14P50914 215 aaKnown RBP17.91■□□□□ 0.46
SMC4-222ENST00000490207 TLE4Q04727 773 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 EMX2Q04743 252 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 STX3Q13277 289 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 HHATQ5VTY9 493 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 GALNT10Q86SR1 603 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 MARCH3Q86UD3 253 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 RIMKLAQ8IXN7 391 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 NUDT8Q8WV74 236 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 OTUB1Q96FW1 271 aaPredicted RBP17.91■□□□□ 0.46
SMC4-222ENST00000490207 CHMP6Q96FZ7 201 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 C16orf58Q96GQ5 468 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 LURAP1Q96LR2 239 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 DUSP26Q9BV47 211 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 BHLHE41Q9C0J9 482 aaPredicted RBP17.91■□□□□ 0.46
SMC4-222ENST00000490207 CALHM2Q9HA72 323 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 NEUROD4Q9HD90 331 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 MED11Q9P086 117 aa17.91■□□□□ 0.46
SMC4-222ENST00000490207 CSMD1Q96PZ7 3565 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms