RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ZIC1Q15915 447 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 WDR88Q6ZMY6 472 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 OTUD6AQ7L8S5 288 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 RANBP3LQ86VV4 465 aaPredicted RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 MCOLN2Q8IZK6 566 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 CADM2Q8N3J6 435 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 LRRC17Q8N6Y2 441 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 FAM184AQ8NB25 1140 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 PHYHIPQ92561 330 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 ZNF75CPQ92670 426 aaPredicted RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 RAB7BQ96AH8 199 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 ACCSQ96QU6 501 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 FTHL17Q9BXU8 183 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 NLNQ9BYT8 704 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 RWDD1Q9H446 243 aaPredicted RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 ADAM22Q9P0K1 906 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 DPM3Q9P2X0 92 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 RNF115Q9Y4L5 304 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 FKBP7Q9Y680 259 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 KANK1Q14678 1352 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 SMARCA2P51531 1590 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 SCAPERQ9BY12 1400 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 IGHV3-35A0A0C4DH35 117 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 FRG2CA6NGY1 282 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 H0YC42 278 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 CASQ2O14958 399 aaPredicted RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 HDAC3O15379 428 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ECDO95905 644 aaPredicted RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 MT-ATP6P00846 226 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 TGFAP01135 160 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 WNT2P09544 360 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ALPIP09923 528 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 TSPY4P0CV99 314 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 TSPY10P0CW01 314 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 RALAP11233 206 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 NCF1P14598 390 aaPredicted RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 RPA1P27694 616 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 PTPN4P29074 926 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 MAGEA4P43358 317 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 XCR1P46094 333 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 METAP1P53582 386 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 CCNA1P78396 465 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 MYBPC1Q00872 1141 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 BEX3Q00994 111 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 GBE1Q04446 702 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ZNF33BQ06732 778 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ELP6Q0PNE2 266 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 SYCP1Q15431 976 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 RABL6Q3YEC7 729 aaPredicted RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 PAN3Q58A45 887 aaKnown RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 HERC4Q5GLZ8 1057 aaPredicted RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 OR6B2Q6IFH4 312 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ATRAIDQ6UW56 229 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 YRDCQ86U90 279 aaKnown RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 GPBP1Q86WP2 473 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 APOBEC3FQ8IUX4 373 aaKnown RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 FBXO16Q8IX29 292 aaPredicted RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 CENPSQ8N2Z9 138 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 OR4F17Q8NGA8 305 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 CCDC26Q8TAB7 109 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 RNF139Q8WU17 664 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 GIMAP1Q8WWP7 306 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ANKRD7Q92527 254 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 TMEM45BQ96B21 275 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 FAF2Q96CS3 445 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 TUBGCP3Q96CW5 907 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ZNF414Q96IQ9 312 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 CYYR1Q96J86 154 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 OR4F4Q96R69 305 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 KCNK16Q96T55 309 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 CBWD1Q9BRT8 395 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ELOVL4Q9GZR5 314 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 NCOR1P1Q9H4R4 102 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 ASB8Q9H765 288 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 MIEF1Q9NQG6 463 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 SOHLH2Q9NX45 425 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 HOXC10Q9NYD6 342 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 KLRF1Q9NZS2 232 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 IL17CQ9P0M4 197 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 SPASTQ9UBP0 616 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 PCSK1NQ9UHG2 260 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 KLHL21Q9UJP4 597 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 PTBP2Q9UKA9 531 aaKnown RBP2.88□□□□□ -1.95
SSR1-209ENST00000488834 DNPEPQ9ULA0 475 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 PLA2G4CQ9UP65 541 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 SYNJ2O15056 1496 aa2.88□□□□□ -1.95
SSR1-209ENST00000488834 TMEM89A2RUT3 159 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 H0Y9J4 135 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 BUB1O43683 1085 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 LRP3O75074 770 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 AKR7A3O95154 331 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ADCY5O95622 1261 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 DIRAS3O95661 229 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 PTBP3O95758 552 aaKnown RBP2.87□□□□□ -1.95
SSR1-209ENST00000488834 CT45A10P0DMU9 189 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ETS1P14921 441 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ARF4P18085 180 aaPredicted RBP2.87□□□□□ -1.95
SSR1-209ENST00000488834 GDI1P31150 447 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ATP5OP48047 213 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 GBX2P52951 348 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms