RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PPIEQ9UNP9 301 aaKnown RBP17.95■□□□□ 0.46
CCM2-216ENST00000488727 SLC16A6O15403 523 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 PDPK1O15530 556 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 EFNA1P20827 205 aaPredicted RBP17.95■□□□□ 0.46
CCM2-216ENST00000488727 NT5EP21589 574 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 GALNSP34059 522 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 FRKP42685 505 aaPredicted RBP17.95■□□□□ 0.46
CCM2-216ENST00000488727 PGDP52209 483 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 RRADP55042 308 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 KCNAB2Q13303 367 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 PRICKLE4Q2TBC4 344 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 COL28A1Q2UY09 1125 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 ZNF773Q6PK81 442 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 CLEC1AQ8NC01 280 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 B3GNT7Q8NFL0 401 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 OR9A2Q8NGT5 310 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 SLC2A12Q8TD20 617 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 DAZLQ92904 295 aaKnown RBP17.95■□□□□ 0.46
CCM2-216ENST00000488727 HSH2DQ96JZ2 352 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 AMDHD1Q96NU7 426 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 GLIPR2Q9H4G4 154 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 ATP13A2Q9NQ11 1180 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 NTSP30990 170 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 MPIP34949 423 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 RPS6KA3P51812 740 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 NCBP2P52298 156 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCM2-216ENST00000488727 MGAT2Q10469 447 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 AIMP2Q13155 320 aaKnown RBP17.94■□□□□ 0.46
CCM2-216ENST00000488727 FAM111BQ6SJ93 734 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 GALNT12Q8IXK2 581 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 MORN4Q8NDC4 146 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 ZNF721Q8TF20 911 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 TUBA1CQ9BQE3 449 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 OR8D2Q9GZM6 311 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 MAT2BQ9NZL9 334 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 ZNF223Q9UK11 482 aaPredicted RBP17.94■□□□□ 0.46
CCM2-216ENST00000488727 ABCG2Q9UNQ0 655 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 ORC6Q9Y5N6 252 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 ITPR1Q14643 2758 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 CACNA1GO43497 2377 aa17.94■□□□□ 0.46
CCM2-216ENST00000488727 ATMQ13315 3056 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 HS6ST1O60243 411 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 IGKV3-11P04433 115 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 JUNBP17275 347 aaPredicted RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 FPR1P21462 350 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 DNAJA1P31689 397 aaKnown RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 MVDP53602 400 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 GABARAPL2P60520 117 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 RBBP4Q09028 425 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 TOP3AQ13472 1001 aaPredicted RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 ELOAQ14241 798 aaKnown RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 ZNF267Q14586 743 aaPredicted RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 EXT1Q16394 746 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 TBR1Q16650 682 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 C11orf65Q8NCR3 313 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 SIMC1Q8NDZ2 872 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 OR52N2Q8NGI0 321 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 M1APQ8TC57 530 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 ELP5Q8TE02 316 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 APOBEC4Q8WW27 367 aaKnown RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 EXTL1Q92935 676 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 CTHRC1Q96CG8 243 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 SENP5Q96HI0 755 aaPredicted RBP17.93■□□□□ 0.46
CCM2-216ENST00000488727 CNPPD1Q9BV87 410 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 EPG5Q9HCE0 2579 aa17.93■□□□□ 0.46
CCM2-216ENST00000488727 CLPSP04118 112 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 SERPINA7P05543 415 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 S1PR1P21453 382 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ELK4P28324 431 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 PIGAP37287 484 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ARHGDIAP52565 204 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 HBA1P69905 142 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 FADDQ13158 208 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ZNF628Q5EBL2 1059 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ZNF691Q5VV52 312 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ERI1Q8IV48 349 aaKnown RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 OR10Q1Q8NGQ4 319 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ZNF675Q8TD23 568 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 FBLIM1Q8WUP2 373 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 NUDT9Q9BW91 350 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 SEMA4CQ9C0C4 833 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 RAD21L1Q9H4I0 556 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ANKRA2Q9H9E1 313 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 MMP25Q9NPA2 562 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ERVK-19Q9WJR5 959 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 LOC100130705A0A1B0GUX0 176 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 TNFRSF21O75509 655 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 TRMUO75648 421 aaKnown RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 NUDT7P0C024 238 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ICAM2P13598 275 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 CRHBPP24387 322 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ITGA3P26006 1051 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 SSTR4P31391 388 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 RYKP34925 604 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 CCL11P51671 97 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 CRYBA2P53672 197 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 SOX8P57073 446 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 VLDLRP98155 873 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 FUT7Q11130 342 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 MAP4K2Q12851 820 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms