RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 RAB3IL1Q8TBN0 382 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 METTL21AQ8WXB1 218 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 CABS1Q96KC9 395 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 LINC00615Q96LM1 132 aaPredicted RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 ARPC5LQ9BPX5 153 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 CCM2Q9BSQ5 444 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 NPLQ9BXD5 320 aaPredicted RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 POLR1EQ9GZS1 481 aaKnown RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 EXO5Q9H790 373 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 MAGEE1Q9HCI5 957 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 MKKSQ9NPJ1 570 aaPredicted RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 C14orf105Q9NVL8 296 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 HCN3Q9P1Z3 774 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 IL36RNQ9UBH0 155 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 ZNF223Q9UK11 482 aaPredicted RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 RPL26L1Q9UNX3 145 aaKnown RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 MAGED1Q9Y5V3 778 aaPredicted RBP3.87□□□□□ -1.79
CNN3-206ENST00000487539 PTGDR2Q9Y5Y4 395 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 SCINQ9Y6U3 715 aa3.87□□□□□ -1.79
CNN3-206ENST00000487539 A0A096LPK6 155 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 SIGLEC16A6NMB1 481 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 A8MXE2 369 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 STX16-NPEPL1H3BU86 382 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 STX16O14662 325 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 HS3ST1O14792 307 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 LIASO43766 372 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 CDC123O75794 336 aaPredicted RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 OR6B1O95007 311 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 IL1AP01583 271 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 CD8AP01732 235 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 DANCRP0C864 163 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 PRSS56P0CW18 603 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 PKLRP30613 574 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 OPRM1P35372 400 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 CPOXP36551 454 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 GPR12P47775 334 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 MTNR1AP48039 350 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 CDH6P55285 790 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 RPS4XP62701 263 aaKnown RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 CRYZQ08257 329 aaKnown RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 CETN1Q12798 172 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 PNOCQ13519 176 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 IL13RA2Q14627 380 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 KIR2DS3Q14952 304 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 EXT1Q16394 746 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 AP5B1Q2VPB7 878 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 BCL7AQ4VC05 210 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 ERMARDQ5T6L9 678 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 IL20RBQ6UXL0 311 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 KRBA2Q6ZNG9 492 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 SH2D5Q6ZV89 423 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 ENOSF1Q7L5Y1 443 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 SLC22A16Q86VW1 577 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 BBS5Q8N3I7 341 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 NKAPQ8N5F7 415 aaKnown RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 ZNF611Q8N823 705 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 NFAM1Q8NET5 270 aaPredicted RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 CEP70Q8NHQ1 597 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 HM13Q8TCT9 377 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 PHF21BQ96EK2 531 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 MCEEQ96PE7 176 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 TSG101Q99816 390 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 RHNO1Q9BSD3 238 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 RAB11FIP5Q9BXF6 653 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 ZNHIT6Q9NWK9 470 aaKnown RBP3.86□□□□□ -1.79
CNN3-206ENST00000487539 OR6C2Q9NZP2 312 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 NDRG3Q9UGV2 375 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 KCNS2Q9ULS6 477 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 ASF1AQ9Y294 204 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 HEATR5BQ9P2D3 2071 aa3.86□□□□□ -1.79
CNN3-206ENST00000487539 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 GLYATL1P3A0A0U1RQE8 302 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 PABPN1LA6NDY0 278 aaKnown RBP3.85□□□□□ -1.79
CNN3-206ENST00000487539 C17orf100A8MU93 164 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 SGK494L7N484 410 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 IFRD1O00458 451 aaPredicted RBP3.85□□□□□ -1.79
CNN3-206ENST00000487539 CCL22O00626 93 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 EPHB6O15197 1021 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 MFSD11O43934 449 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 SRPX2O60687 465 aaPredicted RBP3.85□□□□□ -1.79
CNN3-206ENST00000487539 LRATO95237 230 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 YEATS4O95619 227 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 LSM8O95777 96 aaKnown RBP3.85□□□□□ -1.79
CNN3-206ENST00000487539 CCL3P10147 92 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 CNR1P21554 472 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 MIPP30301 263 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 PIGAP37287 484 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 SOX3P41225 446 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 XCR1P46094 333 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 CD151P48509 253 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 HCAR3P49019 387 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 PCYT1AP49585 367 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 PRLHRP49683 370 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 CCR8P51685 355 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 NDUFA8P51970 172 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 OR4D2P58180 307 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 ZBTB17Q13105 803 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 ABRAXAS2Q15018 415 aa3.85□□□□□ -1.79
CNN3-206ENST00000487539 NSDHLQ15738 373 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms