RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PIK3R3Q92569 461 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 YIPF4Q9BSR8 244 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 TMUB1Q9BVT8 246 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 TUBB1Q9H4B7 451 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 FAM120CQ9NX05 1096 aaKnown RBP22.18■■□□□ 1.14
LIME1-206ENST00000487026 BAIAP2L1Q9UHR4 511 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 NF1P21359 2839 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 A0A1W2PNV4 684 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 TLDC2A0PJX2 215 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 PDPK1O15530 556 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 HCRTR2O43614 444 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 TNFSF13O75888 250 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 UTS2O95399 124 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 LINC00032P0C843 101 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 PRPH2P23942 346 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 PRKAG1P54619 331 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 PCLAFQ15004 111 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 POU4F3Q15319 338 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 ZNF385BQ569K4 471 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 APOOLQ6UXV4 268 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 GALNT10Q86SR1 603 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 CLHC1Q8NHS4 586 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 FIG4Q92562 907 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 TSSK3Q96PN8 268 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 ACBD3Q9H3P7 528 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 PIGMQ9H3S5 423 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 MRTO4Q9UKD2 239 aaKnown RBP22.17■■□□□ 1.14
LIME1-206ENST00000487026 ABCG2Q9UNQ0 655 aa22.17■■□□□ 1.14
LIME1-206ENST00000487026 A8MXE2 369 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 SEC14L5O43304 696 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 PRPS2P11908 318 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 GPC1P35052 558 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 CLK3P49761 638 aaKnown RBP22.16■■□□□ 1.14
LIME1-206ENST00000487026 GRAMD1BQ3KR37 738 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 RFTN2Q52LD8 501 aaPredicted RBP22.16■■□□□ 1.14
LIME1-206ENST00000487026 MEIOBQ8N635 442 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 CNEP1R1Q8N9A8 125 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 OR2W6PQ8NHA6 318 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 GPR151Q8TDV0 419 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 METTL2AQ96IZ6 378 aaKnown RBP22.16■■□□□ 1.14
LIME1-206ENST00000487026 PTGES2Q9H7Z7 377 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 PPCSQ9HAB8 311 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 PACSIN3Q9UKS6 424 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 EDARQ9UNE0 448 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 VPS13CQ709C8 3753 aa22.16■■□□□ 1.14
LIME1-206ENST00000487026 OR2M5A3KFT3 312 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 SLC22A20A6NK97 555 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 SHISA8B8ZZ34 492 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 H3BML4 177 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 SMNDC1O75940 238 aaKnown RBP eCLIP22.15■■□□□ 1.14
LIME1-206ENST00000487026 SDC1P18827 310 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 EFNA1P20827 205 aaPredicted RBP22.15■■□□□ 1.14
LIME1-206ENST00000487026 CPOXP36551 454 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 DIO3P55073 304 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 VWA1Q6PCB0 445 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 PAMR1Q6UXH9 720 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 TGIF2LYQ8IUE0 185 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 CHDHQ8NE62 594 aaPredicted RBP22.15■■□□□ 1.14
LIME1-206ENST00000487026 FBXO30Q8TB52 745 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 STARD4Q96DR4 205 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 C1GALT1C1Q96EU7 318 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 TBL1XR1Q9BZK7 514 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 REEP4Q9H6H4 257 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 PLEKHF2Q9H8W4 249 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 C3orf14Q9HBI5 128 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 SH3BP4Q9P0V3 963 aa22.15■■□□□ 1.14
LIME1-206ENST00000487026 SH3D21A4FU49 640 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 TMEM233B4DJY2 109 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 NPIPB8E9PQR5 432 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 TRIM13O60858 407 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 KCNH1O95259 989 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 ANGPTL1O95841 491 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 PSMD4P55036 377 aaKnown RBP22.14■■□□□ 1.13
LIME1-206ENST00000487026 MANFP55145 182 aaKnown RBP22.14■■□□□ 1.13
LIME1-206ENST00000487026 CLDN20P56880 219 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 RPL38P63173 70 aaKnown RBP22.14■■□□□ 1.13
LIME1-206ENST00000487026 FAM27E3Q08E93 113 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 GALNTL6Q49A17 601 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 NUP43Q8NFH3 380 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 SMPDL3BQ92485 455 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 SLC9A6Q92581 669 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 PPCDCQ96CD2 204 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 FCRL1Q96LA6 429 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 DACH2Q96NX9 599 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 CCT7Q99832 543 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 PINK1Q9BXM7 581 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 DNAJC15Q9Y5T4 150 aa22.14■■□□□ 1.13
LIME1-206ENST00000487026 HRGP04196 525 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 CHRNGP07510 517 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 KLK2P20151 261 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 EEF1A1P68104 462 aaKnown RBP22.13■■□□□ 1.13
LIME1-206ENST00000487026 SIRPAP78324 504 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 GANABQ14697 944 aaKnown RBP22.13■■□□□ 1.13
LIME1-206ENST00000487026 EEF1A1P5Q5VTE0 462 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 KANK2Q63ZY3 851 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 SZRD1Q7Z422 152 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 BTLAQ7Z6A9 289 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 DDIASQ8IXT1 998 aa22.13■■□□□ 1.13
LIME1-206ENST00000487026 TRIM44Q96DX7 344 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms