RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 COMMD4Q9H0A8 199 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 DHX33Q9H6R0 707 aaKnown RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMC4-218ENST00000486711 AGPAT5Q9NUQ2 364 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 RBM28Q9NW13 759 aaKnown RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 FAM120CQ9NX05 1096 aaKnown RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 IMPAD1Q9NX62 359 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 AATFQ9NY61 560 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMC4-218ENST00000486711 ARMCX1Q9P291 453 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 PRODH2Q9UF12 536 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 CARMIL1Q5VZK9 1371 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 FER1L5A0AVI2 2057 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 EFCAB7A8K855 629 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 A8MUI8 341 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 CLDN5O00501 218 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 SDHDO14521 159 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 TM9SF1O15321 606 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 RAMP1O60894 148 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 STX11O75558 287 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 RHBDL1O75783 438 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 MBD3O95983 291 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 KRT8P05787 483 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 SOX6P35712 828 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 POU3F4P49335 361 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 ARHGDIBP52566 201 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 HSD17B7P56937 341 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 PLOD1Q02809 727 aaPredicted RBP3.57□□□□□ -1.84
SMC4-218ENST00000486711 ASPHD2Q6ICH7 369 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 ARL6IP6Q8N6S5 226 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 VN1R17PQ8TDU5 208 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 DTNBP1Q96EV8 351 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 SDSLQ96GA7 329 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 DHTKD1Q96HY7 919 aaPredicted RBP3.57□□□□□ -1.84
SMC4-218ENST00000486711 PIWIL1Q96J94 861 aaKnown RBP3.57□□□□□ -1.84
SMC4-218ENST00000486711 VPS39Q96JC1 886 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 PALMDQ9NP74 551 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 EXOSC3Q9NQT5 275 aaKnown RBP3.57□□□□□ -1.84
SMC4-218ENST00000486711 ELOVL2Q9NXB9 296 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 DHRS4-AS1Q9P1J3 65 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 B9D1Q9UPM9 204 aa3.57□□□□□ -1.84
SMC4-218ENST00000486711 SF3B1O75533 1304 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMC4-218ENST00000486711 TRAV9-2A0A087WT02 112 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 GSAPA4D1B5 854 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 PHF1O43189 567 aaPredicted RBP3.56□□□□□ -1.84
SMC4-218ENST00000486711 DUX1O43812 170 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 IGHG3P01860 377 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 BCKDHAP12694 445 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 GATA1P15976 413 aaPredicted RBP3.56□□□□□ -1.84
SMC4-218ENST00000486711 IGFBP5P24593 272 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 ADSSP30520 456 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 PRPHP41219 470 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 PTGER3P43115 390 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 FNTAP49354 379 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 NTHL1P78549 312 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 PUDPQ08623 228 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 COX10Q12887 443 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 IL18R1Q13478 541 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 CAMK4Q16566 473 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 SLC36A3Q495N2 470 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 DCST2Q5T1A1 773 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 NCR3LG1Q68D85 454 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 SLC25A24Q6NUK1 477 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 BLOC1S2Q6QNY1 142 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 ZNF600Q6ZNG1 722 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 ARMCX2Q7L311 632 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 SERINC5Q86VE9 423 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 ZSCAN4Q8NAM6 433 aaPredicted RBP3.56□□□□□ -1.84
SMC4-218ENST00000486711 AGAP11Q8TF27 550 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 RAB7BQ96AH8 199 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 TESK2Q96S53 571 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 APOL2Q9BQE5 337 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 SLC30A2Q9BRI3 323 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 SLC25A51Q9H1U9 297 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 GPN2Q9H9Y4 310 aaPredicted RBP3.56□□□□□ -1.84
SMC4-218ENST00000486711 CLEC5AQ9NY25 188 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 CRLS1Q9UJA2 301 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 SNX6Q9UNH7 406 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 PCNX3Q9H6A9 2034 aa3.56□□□□□ -1.84
SMC4-218ENST00000486711 PPIAL4CA0A0B4J2A2 164 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 ZSCAN5CA6NGD5 496 aaPredicted RBP3.55□□□□□ -1.84
SMC4-218ENST00000486711 FAM74A7A6NL05 159 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 G3V3Y1 287 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 GPRIN2O60269 458 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 SRPX2O60687 465 aaPredicted RBP3.55□□□□□ -1.84
SMC4-218ENST00000486711 TRIM3O75382 744 aaPredicted RBP3.55□□□□□ -1.84
SMC4-218ENST00000486711 VENTXO95231 258 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 JCHAINP01591 159 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 CHRNA1P02708 482 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 PPIAL4GP0DN37 164 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 FOLR2P14207 255 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 PSMA5P28066 241 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 ACVR1BP36896 505 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 GNPDA1P46926 289 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 IST1P53990 364 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 BDH1Q02338 343 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 LTB4RQ15722 352 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 TATDN3Q17R31 274 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 SLC22A6Q4U2R8 563 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 FAM74A3Q4VXF1 159 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms