RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SOX17Q9H6I2 414 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 MTHFD2LQ9H903 347 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 APMAPQ9HDC9 416 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 KRT84Q9NSB2 600 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 ACER3Q9NUN7 267 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 SLC13A4Q9UKG4 626 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 SRPK3Q9UPE1 567 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 IFT52Q9Y366 437 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 WDR45Q9Y484 360 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
POLR2J3-204ENST00000486319 A0A1B0GX78 115 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 TGFBR3LH3BV60 316 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 J3KTA2 159 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 SLC16A6O15403 523 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 UGT2B11O75310 529 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 CBX7O95931 251 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 PRKAR1BP31321 381 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 LIMS1P48059 325 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 TMPRSS3P57727 454 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 BTG2P78543 158 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 ZNF155Q12901 538 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 DSG2Q14126 1118 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 IL11RAQ14626 422 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 ZNHIT3Q15649 155 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 EXOC3L2Q2M3D2 409 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 COLEC12Q5KU26 742 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 TCTN3Q6NUS6 607 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 TTC33Q6PID6 262 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 DHRS4L2Q6PKH6 230 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 FRRS1Q6ZNA5 592 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 DGAT2L6Q6ZPD8 337 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 OLIG3Q7RTU3 272 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 DTX1Q86Y01 620 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 APLFQ8IW19 511 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 C8orf59Q8N0T1 100 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 TAGAPQ8N103 731 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 COX18Q8N8Q8 333 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 OR10G2Q8NGC3 310 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 VANGL1Q8TAA9 524 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 NR4A3Q92570 626 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 CCNL2Q96S94 520 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 SDF2Q99470 211 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 PSD2Q9BQI7 771 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 LMF2Q9BU23 707 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 YIPF2Q9BWQ6 316 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 RSPO3Q9BXY4 272 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 YTHDF1Q9BYJ9 559 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 ZNF304Q9HCX3 659 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 SIDT1Q9NXL6 827 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 KLHL28Q9NXS3 571 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 DHCR7Q9UBM7 475 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 ZNF232Q9UNY5 417 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 CLDN16Q9Y5I7 305 aa13.55□□□□□ -0.24
POLR2J3-204ENST00000486319 LOC100130705A0A1B0GUX0 176 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 ARRDC5A6NEK1 342 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 A6NHS1 94 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 H3BNH8 94 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 FCMRO60667 390 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 PRAMEF2O60811 474 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 NME6O75414 186 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 STX11O75558 287 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 NKX2-2O95096 273 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 CLIC3O95833 236 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 S1PR1P21453 382 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 FBLP22087 321 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 OR1D4P47884 311 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 TPD52P55327 224 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 CXADRP78310 365 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 POU6F2P78424 691 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 DEF8Q6ZN54 512 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 PEX5LQ8IYB4 626 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 OFCC1Q8IZS5 231 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 OR52P1PQ8NH57 321 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 OR52J3Q8NH60 311 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 GPR151Q8TDV0 419 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 DOK4Q8TEW6 326 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 ALPK1Q96QP1 1244 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 ZNF350Q9GZX5 532 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 SAP130Q9H0E3 1048 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 CPNE5Q9HCH3 593 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 POLE3Q9NRF9 147 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 LANCL2Q9NS86 450 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 TMCC3Q9ULS5 477 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 FER1L5A0AVI2 2057 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 AHCTF1Q8WYP5 2266 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 TTC36A6NLP5 189 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 CCNB2O95067 398 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 IFNA16P05015 189 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 H1F0P07305 194 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 THBS1P07996 1170 aa13.54□□□□□ -0.24
POLR2J3-204ENST00000486319 GUSBP08236 651 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms