RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RPS6KA3P51812 740 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CRISP3P54108 245 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 PRKAG1P54619 331 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 LIM2P55344 173 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 GK3PQ14409 553 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SLC36A3Q495N2 470 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 NADK2Q4G0N4 442 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 DEFB134Q4QY38 66 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 TCTE1Q5JU00 501 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 ATAD3BQ5T9A4 648 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 C18orf63Q68DL7 685 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 ALKBH2Q6NS38 261 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 TNFAIP8L2Q6P589 184 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SHQ1Q6PI26 577 aaKnown RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 TTC33Q6PID6 262 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 LANCL3Q6ZV70 420 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 VTCN1Q7Z7D3 282 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF605Q86T29 641 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CARM1Q86X55 608 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SLC44A2Q8IWA5 706 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CCDC116Q8IYX3 515 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 LRRC25Q8N386 305 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 OR2Y1Q8NGV0 311 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 STT3BQ8TCJ2 826 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CNRIP1Q96F85 164 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 RMND5BQ96G75 393 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SMIM10Q96HG1 83 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CITED4Q96RK1 184 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 MAPKAP1Q9BPZ7 522 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 ANKHQ9HCJ1 492 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF304Q9HCX3 659 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SIRT3Q9NTG7 399 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 P4HTMQ9NXG6 502 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CALML5Q9NZT1 146 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SAMHD1Q9Y3Z3 626 aaKnown RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 PCDHGB3Q9Y5G1 929 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 HS3ST3B1Q9Y662 390 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SLC22A7Q9Y694 548 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CPAMD8Q8IZJ3 1885 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 NBASA2RRP1 2371 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 UPK1AO00322 258 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 PRKRAO75569 313 aaKnown RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 SMNDC1O75940 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 PGM3O95394 542 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 H6PDO95479 791 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 SNAP29O95721 258 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 F10P00742 488 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 C1QCP02747 245 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 OPN1SWP03999 348 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 SEMG1P04279 462 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 IFNW1P05000 195 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 ALPLP05186 524 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 IGFBP5P24593 272 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 XKP51811 444 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 MLLT10P55197 1068 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 KCNJ10P78508 379 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 HPCAP84074 193 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 PPP2R2BQ00005 443 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 Q0VFX4 171 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 CEBPEQ15744 281 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 IGFBP7Q16270 282 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 MFSD4BQ5TF39 518 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 TMEM107Q6UX40 140 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 OVCH1Q7RTY7 1134 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 GALNT10Q86SR1 603 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 CYP4Z1Q86W10 505 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 HORMAD2Q8N7B1 307 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 NUP43Q8NFH3 380 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 OR10Q1Q8NGQ4 319 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 BBS10Q8TAM1 723 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 ADAMTS18Q8TE60 1221 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 SLC38A5Q8WUX1 472 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 XAGE5Q8WWM1 108 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 PROX1Q92786 737 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 TANKQ92844 425 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 WBP1Q96G27 269 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 TMEM19Q96HH6 336 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 MAGED4Q96JG8 741 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 EPYCQ99645 322 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 CRB3Q9BUF7 120 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 YTHDF1Q9BYJ9 559 aaKnown RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 MRPS26Q9BYN8 205 aaKnown RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 FAM192AQ9GZU8 254 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 GABARAPL1Q9H0R8 117 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 TSPAN10Q9H1Z9 355 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 OR51I1Q9H343 314 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF696Q9H7X3 374 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 EXD2Q9NVH0 621 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 DDX18Q9NVP1 670 aaKnown RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 UBAP1Q9NZ09 502 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 NDUFA13Q9P0J0 144 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 SEC14L3Q9UDX4 400 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 FBXL4Q9UKA2 621 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 SLC13A4Q9UKG4 626 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 CES1P1Q9UKY3 287 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 LIPT1Q9Y234 373 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 MRPS33Q9Y291 106 aaKnown RBP6.44□□□□□ -1.38
BRCA1-216ENST00000484087 U3KQV3 271 aa6.44□□□□□ -1.38
BRCA1-216ENST00000484087 UBR5O95071 2799 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms