RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ELAVL1Q15717 326 aaKnown RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 DCST1Q5T197 706 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 XAF1Q6GPH4 301 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 RBM45Q8IUH3 476 aaKnown RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 RCBTB1Q8NDN9 531 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 ARMC7Q9H6L4 198 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 LIN28AQ9H9Z2 209 aaKnown RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 CFL2Q9Y281 166 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 LAMA1P25391 3075 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 C17orf105B2RV13 164 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 PCDH17O14917 1159 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 KCNK2O95069 426 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 LDOC1O95751 146 aaPredicted RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 TOP3AQ13472 1001 aaPredicted RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 MINDY4Q4G0A6 757 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 GALNT5Q7Z7M9 940 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 PLPP5Q8NEB5 264 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 OR13F1Q8NGS4 319 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 C12orf43Q96C57 262 aaKnown RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 ANKRD19PQ9H560 264 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 Q9N2J8 555 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 CHST2Q9Y4C5 530 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 KMT2EQ8IZD2 1858 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 BCKDKO14874 412 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 HTR1AP08908 422 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 EEF1A1P68104 462 aaKnown RBP24.35■■□□□ 1.49
SHOX2-204ENST00000483851 NPRL3Q12980 569 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 IL11RAQ14626 422 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 ZSWIM7Q19AV6 140 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 CCNJQ5T5M9 372 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 PARP8Q8N3A8 854 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 PTPMT1Q8WUK0 201 aaPredicted RBP24.35■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF566Q969W8 418 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 ART5Q96L15 291 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 WFDC6Q9BQY6 131 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 FUZQ9BT04 418 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 FNDC11Q9BVV2 318 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 POLR2J2Q9GZM3 115 aaKnown RBP24.35■■□□□ 1.49
SHOX2-204ENST00000483851 POLR2J3Q9H1A7 115 aaKnown RBP24.35■■□□□ 1.49
SHOX2-204ENST00000483851 TIMMDC1Q9NPL8 285 aa24.35■■□□□ 1.49
SHOX2-204ENST00000483851 OR2W5A6NFC9 320 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 SCRG1O75711 98 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 NID1P14543 1247 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 CBLP22681 906 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 ELAVL4P26378 380 aaKnown RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 PGDP52209 483 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 TPD52P55327 224 aaPredicted RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 ZFP36L1Q07352 338 aaKnown RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 GPR68Q15743 365 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 MFSD4BQ5TF39 518 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 C1orf189Q5VU69 101 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF770Q6IQ21 691 aaPredicted RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 PPP1R3BQ86XI6 285 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 TMEM151BQ8IW70 566 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 C16orf52Q8NHV5 167 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 SENP5Q96HI0 755 aaPredicted RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 G6PC3Q9BUM1 346 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 RIBC2Q9H4K1 309 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 RHCGQ9UBD6 479 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 NDRG4Q9ULP0 352 aaKnown RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 SEC16AO15027 2179 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 HRKO00198 91 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 GALR2O43603 387 aaPredicted RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 SEC14L2O76054 403 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 ADAP00813 363 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 FGF5P12034 268 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 NPTX1Q15818 432 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 PHF19Q5T6S3 580 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 TSPYL5Q86VY4 417 aaPredicted RBP24.34■■□□□ 1.49
SHOX2-204ENST00000483851 OIT3Q8WWZ8 545 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 SGCDQ92629 289 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 PITX2Q99697 317 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 APOL4Q9BPW4 351 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 ADNPQ9H2P0 1102 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 SMOC1Q9H4F8 434 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 C14orf105Q9NVL8 296 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 MGAT4BQ9UQ53 548 aa24.34■■□□□ 1.49
SHOX2-204ENST00000483851 GXYLT2A0PJZ3 443 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 CSTF2P33240 577 aaKnown RBP eCLIP24.33■■□□□ 1.49
SHOX2-204ENST00000483851 CLK3P49761 638 aaKnown RBP24.33■■□□□ 1.49
SHOX2-204ENST00000483851 IL1RL1Q01638 556 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 PIN1Q13526 163 aaPredicted RBP24.33■■□□□ 1.49
SHOX2-204ENST00000483851 NEDD8Q15843 81 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 VWA2Q5GFL6 755 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 FGD3Q5JSP0 725 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF836Q6ZNA1 936 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 SPARTQ8N0X7 666 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 TOR1AIP2Q8NFQ8 470 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 OR14A16Q8NHC5 309 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 SLC46A1Q96NT5 459 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 CLCA3PQ9Y6N3 262 aa24.33■■□□□ 1.49
SHOX2-204ENST00000483851 TRBV4-1A0A0J9YWV2 114 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CLPSP04118 112 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CCDC159P0C7I6 412 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 AGXTP21549 392 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 EEF1B2P24534 225 aaKnown RBP24.32■■□□□ 1.48
SHOX2-204ENST00000483851 RGS8P57771 180 aaPredicted RBP24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CDK5R2Q13319 367 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 RAPSNQ13702 412 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 GTF2IRD2BQ6EKJ0 949 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms