RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 APOOLQ6UXV4 268 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 EXOC3L1Q86VI1 746 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 NINJ1Q92982 152 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 ZFP3Q96NJ6 502 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 FOXC2Q99958 501 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 ZNF337Q9Y3M9 751 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 ZFHX3Q15911 3703 aa16.77■□□□□ 0.27
CLK1-211ENST00000481641 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 A0A1W2PNV4 684 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 TMEM233B4DJY2 109 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 SHISA8B8ZZ34 492 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 TNFSF13O75888 250 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 CHRNGP07510 517 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 PEPDP12955 493 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 DNASE1P24855 282 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 GPC1P35052 558 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 PRKAG1P54619 331 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 RPL38P63173 70 aaKnown RBP16.76■□□□□ 0.27
CLK1-211ENST00000481641 SORDQ00796 357 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 POU4F3Q15319 338 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 BCL2A1Q16548 175 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 GRAMD1BQ3KR37 738 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 RFTN2Q52LD8 501 aaPredicted RBP16.76■□□□□ 0.27
CLK1-211ENST00000481641 P4HA3Q7Z4N8 544 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 FBXO30Q8TB52 745 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 FIG4Q92562 907 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 TRIM44Q96DX7 344 aaPredicted RBP16.76■□□□□ 0.27
CLK1-211ENST00000481641 DTNBP1Q96EV8 351 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 FCRL1Q96LA6 429 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 MECRQ9BV79 373 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 CXXC4Q9H2H0 198 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 PPCSQ9HAB8 311 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 SDHAF3Q9NRP4 125 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 FAM120CQ9NX05 1096 aaKnown RBP16.76■□□□□ 0.27
CLK1-211ENST00000481641 SH3BP4Q9P0V3 963 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 ABCG2Q9UNQ0 655 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 DNAJC15Q9Y5T4 150 aa16.76■□□□□ 0.27
CLK1-211ENST00000481641 ZNF469Q96JG9 3925 aaPredicted RBP16.76■□□□□ 0.27
CLK1-211ENST00000481641 OR2M5A3KFT3 312 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 NPIPB8E9PQR5 432 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 SEC14L5O43304 696 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 TRIM13O60858 407 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 DIAPH2O60879 1101 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 PRPS2P11908 318 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 ALDH3A1P30838 453 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 GALNTL6Q49A17 601 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 KANK2Q63ZY3 851 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 VWA1Q6PCB0 445 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 CHMP1BQ7LBR1 199 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 GPR151Q8TDV0 419 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 PPCDCQ96CD2 204 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 C1GALT1C1Q96EU7 318 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 METTL2AQ96IZ6 378 aaKnown RBP16.75■□□□□ 0.27
CLK1-211ENST00000481641 CCT7Q99832 543 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 YIPF4Q9BSR8 244 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 REEP4Q9H6H4 257 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 SLC17A7Q9P2U7 560 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 GIMAP2Q9UG22 337 aa16.75■□□□□ 0.27
CLK1-211ENST00000481641 MRTO4Q9UKD2 239 aaKnown RBP16.75■□□□□ 0.27
CLK1-211ENST00000481641 ACANP16112 2415 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 SLC22A20A6NK97 555 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 A8MXE2 369 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 H3BML4 177 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 LSM1O15116 133 aaKnown RBP16.74■□□□□ 0.27
CLK1-211ENST00000481641 SPAG7O75391 227 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 SMNDC1O75940 238 aaKnown RBP eCLIP16.74■□□□□ 0.27
CLK1-211ENST00000481641 ANGPTL1O95841 491 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 ACP2P11117 423 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 CPOXP36551 454 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 MANFP55145 182 aaKnown RBP16.74■□□□□ 0.27
CLK1-211ENST00000481641 CLDN20P56880 219 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 SZRD1Q7Z422 152 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 MEIOBQ8N635 442 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 CNEP1R1Q8N9A8 125 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 BANPQ8N9N5 519 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 NUP43Q8NFH3 380 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 SMPDL3BQ92485 455 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 SLC9A6Q92581 669 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 STARD4Q96DR4 205 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 OTUB1Q96FW1 271 aaPredicted RBP16.74■□□□□ 0.27
CLK1-211ENST00000481641 APOPT1Q96IL0 206 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 ZNF845Q96IR2 970 aaPredicted RBP16.74■□□□□ 0.27
CLK1-211ENST00000481641 FAM111AQ96PZ2 611 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 TMUB1Q9BVT8 246 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 PINK1Q9BXM7 581 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 TBL1XR1Q9BZK7 514 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 ACBD3Q9H3P7 528 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 PIGMQ9H3S5 423 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 PTGES2Q9H7Z7 377 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 ANKZF1Q9H8Y5 726 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 L2HGDHQ9H9P8 463 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 MID2Q9UJV3 735 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 PACSIN3Q9UKS6 424 aa16.74■□□□□ 0.27
CLK1-211ENST00000481641 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 A0A1W2PPR1 153 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 SH3D21A4FU49 640 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 NKX2-2O95096 273 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 KCNH1O95259 989 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 CD99P14209 185 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 MAP3K8P41279 467 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms