RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 REM1O75628 298 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 IL33O95760 270 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 BAG2O95816 211 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 RAP2AP10114 183 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 KCNJ5P48544 419 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 PLCXD2Q0VAA5 305 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.22■□□□□ 0.19
UPF3A-206ENST00000480362 ZNF311Q5JNZ3 666 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 TCTN3Q6NUS6 607 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 VRK2Q86Y07 508 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 PEX5LQ8IYB4 626 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 SLC34A3Q8N130 599 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 GPR32P1Q8NGA4 272 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 IP6K3Q96PC2 410 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 CHID1Q9BWS9 393 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 TRIM45Q9H8W5 580 aaPredicted RBP16.22■□□□□ 0.19
UPF3A-206ENST00000480362 RNPEPL1Q9HAU8 725 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 CACYBPQ9HB71 228 aaKnown RBP16.22■□□□□ 0.19
UPF3A-206ENST00000480362 NKX1-2Q9UD57 310 aaPredicted RBP16.22■□□□□ 0.19
UPF3A-206ENST00000480362 BAG5Q9UL15 447 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 ZNF232Q9UNY5 417 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 IFT52Q9Y366 437 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 PCSK5Q92824 1860 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 AGAP5A6NIR3 686 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 HNRNPRO43390 633 aaKnown RBP16.21■□□□□ 0.19
UPF3A-206ENST00000480362 TIPRLO75663 272 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 UGT2B17O75795 530 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 SEMG1P04279 462 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 FESP07332 822 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 ITGAMP11215 1152 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 ANPEPP15144 967 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 IL7RP16871 459 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 KRT20P35900 424 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 PSMD4P55036 377 aaKnown RBP16.21■□□□□ 0.19
UPF3A-206ENST00000480362 NRG3P56975 720 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 PSPHP78330 225 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 KCNJ10P78508 379 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 Q0VFX4 171 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 SRSF6Q13247 344 aaKnown RBP16.21■□□□□ 0.19
UPF3A-206ENST00000480362 CLN3Q13286 438 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 MAPK14Q16539 360 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 IFI44LQ53G44 452 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 IRAK1BP1Q5VVH5 260 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 TAGAPQ8N103 731 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 DIO2Q92813 273 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 OMA1Q96E52 524 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 PINK1Q9BXM7 581 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 STX18Q9P2W9 335 aaKnown RBP16.21■□□□□ 0.19
UPF3A-206ENST00000480362 MYOTQ9UBF9 498 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 KCNE5Q9UJ90 142 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 MSRB2Q9Y3D2 182 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 PCDHGA10Q9Y5H3 936 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 NPFFR2Q9Y5X5 522 aa16.21■□□□□ 0.19
UPF3A-206ENST00000480362 CENPVL1A0A0U1RR11 272 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 TSPAN2O60636 221 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF354AO60765 605 aaPredicted RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 NADKO95544 446 aaPredicted RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 MT-ND1P03886 318 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 DBIP07108 87 aaKnown RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 TNFRSF1BP20333 461 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 RPS4Y1P22090 263 aaKnown RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 ABCD3P28288 659 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 IL12BP29460 328 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 ATP12AP54707 1039 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 LARS2Q15031 903 aaKnown RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 DHRS4L2Q6PKH6 230 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 PROX1Q92786 737 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 FGF11Q92914 225 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 NAF1Q96HR8 494 aaKnown RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 ADOQ96SZ5 270 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF443Q9Y2A4 671 aaPredicted RBP16.2■□□□□ 0.18
UPF3A-206ENST00000480362 SH3GLB1Q9Y371 365 aa16.2■□□□□ 0.18
UPF3A-206ENST00000480362 NPIPB9F8W1W9 429 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 OR2J2O76002 312 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 UTS2O95399 124 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 LGI1O95970 557 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 SERPINA7P05543 415 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 THBS1P07996 1170 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 CYP4B1P13584 511 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 HOXB6P17509 224 aaKnown RBP16.19■□□□□ 0.18
UPF3A-206ENST00000480362 LCN1P31025 176 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 PRKAR1BP31321 381 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 DCTP40126 519 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 OR1E2P47887 323 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 ID4P47928 161 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 PNLIPRP2P54317 469 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF141Q15928 474 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 ATP1A1-AS1Q5TC04 95 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 COMTD1Q86VU5 262 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 ZDHHC21Q8IVQ6 265 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 KBTBD2Q8IY47 623 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 OR4C3Q8NH37 302 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 SLC22A8Q8TCC7 542 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 LRTOMTQ8WZ04 291 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 ZNF354BQ96LW1 612 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 PKP2Q99959 881 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 HOXD1Q9GZZ0 328 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 CDCP1Q9H5V8 836 aa16.19■□□□□ 0.18
UPF3A-206ENST00000480362 YY1AP1Q9H869 796 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms