RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 SNUPNO95149 360 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 CPN1P15169 458 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 OPRM1P35372 400 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 MC3RP41968 323 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 AGFG1P52594 562 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 DGKQP52824 942 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 MRPS22P82650 360 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 AAGABQ6PD74 315 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 IKBIPQ70UQ0 350 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 TRIM46Q7Z4K8 759 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 YTHDF3Q7Z739 585 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 C9orf106Q8NAJ2 232 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 OR4N2Q8NGD1 307 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 FAM222BQ8WU58 562 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 RNF138Q8WVD3 245 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 NRGNQ92686 78 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 THOC1Q96FV9 657 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 SFXN2Q96NB2 322 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 TUBA1CQ9BQE3 449 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 GPATCH1Q9BRR8 931 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 DDX18Q9NVP1 670 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 FBXL2Q9UKC9 423 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 WBP11Q9Y2W2 641 aaKnown RBP13.02□□□□□ -0.33
ATG4B-218ENST00000479554 ITM2AO43736 263 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 SCO2O43819 266 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 NPHS1O60500 1241 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 HSPA4LO95757 839 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 IL18BPO95998 194 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 UROSP10746 265 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 CD1EP15812 388 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 TACR1P25103 407 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 DNAJA1P31689 397 aaKnown RBP13.01□□□□□ -0.33
ATG4B-218ENST00000479554 ART1P52961 327 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 ARFIP2P53365 341 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 GFRA1P56159 465 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 PSG6Q00889 435 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 SRYQ05066 204 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 PRSS53Q2L4Q9 553 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 OR5M10Q6IEU7 315 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 NOXRED1Q6NXP6 359 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 CCDC121Q6ZUS5 278 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 TRPM8Q7Z2W7 1104 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 OR4K17Q8NGC6 315 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 RFWD2Q8NHY2 731 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG4B-218ENST00000479554 CLEC4MQ9H2X3 399 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-218ENST00000479554 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 ZNF395Q9H8N7 513 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-218ENST00000479554 TNFRSF12AQ9NP84 129 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 TAS2R7Q9NYW3 318 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 PPP4R1LQ9P1A2 415 aa13.01□□□□□ -0.33
ATG4B-218ENST00000479554 C19orf53Q9UNZ5 99 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-218ENST00000479554 A6NNC1 897 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 CLCA1A8K7I4 914 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 PLOD2O00469 737 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 SEC22BO75396 215 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 LYPLA1O75608 230 aaPredicted RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 DCTN3O75935 186 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 TCEA1P23193 301 aaKnown RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 DPP4P27487 766 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 EVI2BP34910 448 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 LHX2P50458 406 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 GAS1P54826 345 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 ZNHIT3Q15649 155 aaPredicted RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 DECR1Q16698 335 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 CYP27C1Q4G0S4 372 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 CLEC6AQ6EIG7 209 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 KIF18BQ86Y91 864 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 WDR75Q8IWA0 830 aaKnown RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 OR2L13Q8N349 312 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 PIWIL2Q8TC59 973 aaKnown RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 METTL2AQ96IZ6 378 aaKnown RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 ZFP3Q96NJ6 502 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 SORT1Q99523 831 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 TM9SF2Q99805 663 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 SFXN3Q9BWM7 321 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 C20orf27Q9GZN8 174 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 Q9N2J8 555 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 RASSF1Q9NS23 344 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 CBLCQ9ULV8 474 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 RPH3AQ9Y2J0 694 aaPredicted RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 MRPS18CQ9Y3D5 142 aaKnown RBP13□□□□□ -0.33
ATG4B-218ENST00000479554 SPG11Q96JI7 2443 aa13□□□□□ -0.33
ATG4B-218ENST00000479554 A0A0G2JND7 137 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 TUBAL3A6NHL2 446 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 UPK1AO00322 258 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 SLC28A1O00337 649 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 RGS14O43566 566 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 PSMG1O95456 288 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 CHMP24386 653 aa12.99□□□□□ -0.33
ATG4B-218ENST00000479554 STARP49675 285 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms