RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 OR2M3Q8NG83 312 aa21.26■□□□□ 0.99
C9orf3-215ENST00000478473 OR14L1PQ8NHC6 308 aa21.26■□□□□ 0.99
C9orf3-215ENST00000478473 MCCC2Q9HCC0 563 aa21.26■□□□□ 0.99
C9orf3-215ENST00000478473 GIN1Q9NXP7 522 aa21.26■□□□□ 0.99
C9orf3-215ENST00000478473 GIMAP2Q9UG22 337 aa21.26■□□□□ 0.99
C9orf3-215ENST00000478473 KCNN3Q9UGI6 736 aa21.26■□□□□ 0.99
C9orf3-215ENST00000478473 ITM2AO43736 263 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 ZWINTO95229 277 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 KCNH1O95259 989 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 IL18BPO95998 194 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 IGKV1D-16P01601 117 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 CAPN3P20807 821 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 PRPS1L1P21108 318 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 LCN1P31025 176 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 LHX2P50458 406 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 PRR5P85299 388 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 EMX2Q04743 252 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 GANABQ14697 944 aaKnown RBP21.25■□□□□ 0.99
C9orf3-215ENST00000478473 PTGR1Q14914 329 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 CEP85LQ5SZL2 805 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 IL23RQ5VWK5 629 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 MFSD12Q6NUT3 480 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 AAGABQ6PD74 315 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 CAMKMTQ7Z624 323 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 KIRREL3Q8IZU9 778 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 RELL2Q8NC24 303 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-215ENST00000478473 PKNOX2Q96KN3 472 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 RTN4RQ9BZR6 473 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 HHATLQ9HCP6 504 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 FLRT3Q9NZU0 649 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 OTOGQ6ZRI0 2925 aa21.25■□□□□ 0.99
C9orf3-215ENST00000478473 GXYLT2A0PJZ3 443 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 SYT5O00445 386 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 DVL2O14641 736 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 IL2RAP01589 272 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 LAMP1P11279 417 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 ZNF708P17019 499 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 DPP4P27487 766 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 ZNF136P52737 540 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 DIO3P55073 304 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 DLX5P56178 289 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 ABCE1P61221 599 aaKnown RBP21.24■□□□□ 0.99
C9orf3-215ENST00000478473 MAD2L1Q13257 205 aaPredicted RBP21.24■□□□□ 0.99
C9orf3-215ENST00000478473 CHI3L2Q15782 390 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.24■□□□□ 0.99
C9orf3-215ENST00000478473 OR5M10Q6IEU7 315 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 LRRC34Q8IZ02 419 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 FNDC5Q8NAU1 212 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 SLC16A11Q8NCK7 471 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 OR7A2PQ8NGA2 310 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 OR5P2Q8WZ92 322 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 FAM120BQ96EK7 910 aaKnown RBP21.24■□□□□ 0.99
C9orf3-215ENST00000478473 ZFP3Q96NJ6 502 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 G6PC3Q9BUM1 346 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 C20orf27Q9GZN8 174 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 ATAD3AQ9NVI7 634 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 PPP4R1LQ9P1A2 415 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 RAP2CQ9Y3L5 183 aa21.24■□□□□ 0.99
C9orf3-215ENST00000478473 ENO4A6NNW6 628 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 LINC01387J3KSC0 135 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 SKAP2O75563 359 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-215ENST00000478473 HSPA4LO95757 839 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 ACP2P11117 423 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 PEX19P40855 299 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 CLDN18P56856 261 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 RCAN2Q14206 197 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 GLYR1Q49A26 553 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-215ENST00000478473 APOOLQ6UXV4 268 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 ZNF781Q8N8C0 355 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 OR4K17Q8NGC6 315 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 GPR151Q8TDV0 419 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 PIK3R3Q92569 461 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 TUBGCP3Q96CW5 907 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 SORT1Q99523 831 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 SH3GL2Q99962 352 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 TUBA1CQ9BQE3 449 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 DUSP22Q9NRW4 184 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 JKAMPQ9P055 326 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 L3MBTL1Q9Y468 752 aa21.23■□□□□ 0.99
C9orf3-215ENST00000478473 A0A1W2PRB8 838 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 C17orf51A8MQB3 221 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 ALG1L2C9J202 215 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 HCRTR2O43614 444 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 SCO2O43819 266 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 SOX30O94993 753 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 UTS2O95399 124 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 MYZAPP0CAP1 466 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 CLK3P49761 638 aaKnown RBP21.22■□□□□ 0.99
C9orf3-215ENST00000478473 CLDN8P56748 225 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 TLE4Q04727 773 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 C17orf67Q0P5P2 114 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 DUSP5Q16690 384 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 CPTPQ5TA50 214 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 PPP1R14CQ8TAE6 165 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 WNT2BQ93097 391 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 RMND5BQ96G75 393 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-215ENST00000478473 SFXN2Q96NB2 322 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 TRIB1Q96RU8 372 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 STACQ99469 402 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 PRPF18Q99633 342 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms