RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ACAD8Q9UKU7 415 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ADAMDEC1O15204 470 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 CSO75390 466 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 MT-CO3P00414 261 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 AK1P00568 194 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 HPRP00739 348 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 POLR2IP36954 125 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 HSPA13P48723 471 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 EMP2P54851 167 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ADARB1P78563 741 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 TRIP6Q15654 476 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 SLC36A3Q495N2 470 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 FAM198BQ6UWH4 519 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 CHERPQ8IWX8 916 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 MARVELD2Q8N4S9 558 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 OR1N1Q8NGS0 311 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 DAZLQ92904 295 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 FKBP10Q96AY3 582 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 DHRS1Q96LJ7 313 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 SLC46A1Q96NT5 459 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 RBM4BQ9BQ04 359 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 RBM4Q9BWF3 364 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 CBLCQ9ULV8 474 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 NTNG1Q9Y2I2 539 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 IFT52Q9Y366 437 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 TRBV4-1A0A0J9YWV2 114 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 NPIPB9F8W1W9 429 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 KLF7O75840 302 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-206ENST00000477085 SOX30O94993 753 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 CLIC3O95833 236 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 THBS1P07996 1170 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 GUSBP08236 651 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 THRBP10828 461 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 IL7RP16871 459 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 AGXTP21549 392 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 SLC5A2P31639 672 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 PPICP45877 212 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 MED21Q13503 144 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 EBPQ15125 230 aaKnown RBP13.36□□□□□ -0.27
COL4A6-206ENST00000477085 FLYWCH1Q4VC44 716 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 KDM4DQ6B0I6 523 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 FAHD1Q6P587 224 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 TMEM205Q6UW68 189 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 GATA6Q92908 595 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 CNBD2Q96M20 576 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 FUZQ9BT04 418 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 SPRY4Q9C004 299 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 NRSN2Q9GZP1 204 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 TOR3AQ9H497 397 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 Q9N2J8 555 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 CTPS2Q9NRF8 586 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 POLE3Q9NRF9 147 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 FLRT3Q9NZU0 649 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 FAM32AQ9Y421 112 aaKnown RBP13.36□□□□□ -0.27
COL4A6-206ENST00000477085 PCDHGA1Q9Y5H4 931 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 CCDC88CQ9P219 2028 aa13.36□□□□□ -0.27
COL4A6-206ENST00000477085 EIF4E1BA6NMX2 242 aaKnown RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 C9orf172C9J069 976 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 HS6ST1O60243 411 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 GADD45GO95257 159 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 DBIP07108 87 aaKnown RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 UMODP07911 640 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 PRG2P13727 222 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 NID1P14543 1247 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 DRD5P21918 477 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF136P52737 540 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 PDK3Q15120 406 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 SEC23BQ15437 767 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 MICAQ29983 383 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 UGT2A3Q6UWM9 527 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 TIPARPQ7Z3E1 657 aaKnown RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 GLRX5Q86SX6 157 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 SLC5A8Q8N695 610 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 APCDD1LQ8NCL9 501 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 MORN4Q8NDC4 146 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 C7orf57Q8NEG2 295 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 OR4C3Q8NH37 302 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 MR1Q95460 341 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 C8orf44Q96CB5 159 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ARSGQ96EG1 525 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 LIN37Q96GY3 246 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 PRRX2Q99811 253 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 STRADBQ9C0K7 418 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 WDR54Q9H977 334 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 MAN2C1Q9NTJ4 1040 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 PISDQ9UG56 409 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 SLC9A8Q9Y2E8 581 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 CDC14CA4D256 554 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 CDHR4A6H8M9 788 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 DYRK3O43781 588 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 STK17BO94768 372 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms