RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 OTX2P32243 289 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 GALNSP34059 522 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 CRISP3P54108 245 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 MTX3Q5HYI7 312 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 ATAD3BQ5T9A4 648 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 TYW3Q6IPR3 259 aaKnown RBP16.74■□□□□ 0.27
ATG4B-217ENST00000475693 FRRS1Q6ZNA5 592 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 ERMP1Q7Z2K6 904 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 GPR32P1Q8NGA4 272 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 PELOQ9BRX2 385 aaKnown RBP16.74■□□□□ 0.27
ATG4B-217ENST00000475693 RLIMQ9NVW2 624 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 IL17BQ9UHF5 180 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 TCFL5Q9UL49 500 aa16.74■□□□□ 0.27
ATG4B-217ENST00000475693 A0A087WXM4 84 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 SUV39H1O43463 412 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 SLITRK5O94991 958 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 NKX2-2O95096 273 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 MFN2O95140 757 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 DLSTP36957 453 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 KCNJ10P78508 379 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 MAPK14Q16539 360 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 CRB2Q5IJ48 1285 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 KIRREL2Q6UWL6 708 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 ZBTB49Q6ZSB9 765 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 CCDC80Q76M96 950 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 EIF3MQ7L2H7 374 aaKnown RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 RBM45Q8IUH3 476 aaKnown RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 OR14A16Q8NHC5 309 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 EFHD2Q96C19 240 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 CHCHD3Q9NX63 227 aaKnown RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 FLRT3Q9NZU0 649 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 ABCG2Q9UNQ0 655 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 FARSAQ9Y285 508 aaKnown RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 TMEM247A6NEH6 219 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 DUXAA6NLW8 204 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 FRS3O43559 492 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 ASNA1O43681 348 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 ZNF354AO60765 605 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 PFDN1O60925 122 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 EPPINO95925 133 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 FOLR3P41439 243 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 IST1P53990 364 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 SELENOWP63302 87 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 VLDLRP98155 873 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 BIKQ13323 160 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 ARHGAP11BQ3KRB8 267 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 TMPRSS7Q7RTY8 843 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 NLGN4XQ8N0W4 816 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 NLGN4YQ8NFZ3 816 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 ADIPOR1Q96A54 375 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 SLC29A1Q99808 456 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 LMF2Q9BU23 707 aaKnown RBP16.73■□□□□ 0.27
ATG4B-217ENST00000475693 PRR14Q9BWN1 585 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 EXD2Q9NVH0 621 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 OR10H1Q9Y4A9 318 aa16.73■□□□□ 0.27
ATG4B-217ENST00000475693 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 DYRK3O43781 588 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 RAD1O60671 282 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 TTKP33981 857 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 NR0B1P51843 470 aaKnown RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 POU6F2P78424 691 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 PUM1Q14671 1186 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 TSEN54Q7Z6J9 526 aaKnown RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 LACC1Q8IV20 430 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 OR4D11Q8NGI4 311 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 SPPL2AQ8TCT8 520 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 HOXB13Q92826 284 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 DUSP22Q9NRW4 184 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 TBCCD1Q9NVR7 557 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 GPR55Q9Y2T6 319 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 WDR45Q9Y484 360 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 CHST2Q9Y4C5 530 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 GPC6Q9Y625 555 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 PCSK5Q92824 1860 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 C2orf92A0A1B0GVN3 265 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 BRINP1O60477 761 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 BCAS1O75363 584 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 GPIP06744 558 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 MYF6P23409 242 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 ESRRGP62508 458 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 CHRNB3Q05901 458 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 IL10RAQ13651 578 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 EBPQ15125 230 aaKnown RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 ZNHIT3Q15649 155 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 FAM98BQ52LJ0 330 aaKnown RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 ARMC8Q8IUR7 673 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 B3GNT7Q8NFL0 401 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 OR7G1Q8NGA0 311 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 VANGL1Q8TAA9 524 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 STACQ99469 402 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 LPAR4Q99677 370 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 DOHHQ9BU89 302 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 SEC14L3Q9UDX4 400 aa16.72■□□□□ 0.27
ATG4B-217ENST00000475693 SAMD4AQ9UPU9 718 aaKnown RBP16.72■□□□□ 0.27
ATG4B-217ENST00000475693 J3KTA2 159 aa16.71■□□□□ 0.27
ATG4B-217ENST00000475693 CD247P20963 164 aa16.71■□□□□ 0.27
ATG4B-217ENST00000475693 ANXA11P50995 505 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms