RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 OCRLQ01968 901 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 MAD2L1Q13257 205 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 ZNF630Q2M218 657 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 SLC9B1Q4ZJI4 515 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 NXNQ6DKJ4 435 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 TMEM211Q6ICI0 200 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 B3GNT6Q6ZMB0 384 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 OLIG3Q7RTU3 272 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 COX18Q8N8Q8 333 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 CDRT4Q8N9R6 151 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 OR4K17Q8NGC6 315 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 OR4C3Q8NH37 302 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 DUSP19Q8WTR2 217 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 CA5BP1Q8WTZ4 195 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 RNF138Q8WVD3 245 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 ZNF75CPQ92670 426 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 RND1Q92730 232 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 CDS1Q92903 461 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 ABTB1Q969K4 478 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 ATP6V1G3Q96LB4 118 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 TEX37Q96LM6 180 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 GIN1Q9NXP7 522 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 ASIC5Q9NY37 505 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 NTMQ9P121 344 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 PPP4R1LQ9P1A2 415 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 DKKL1Q9UK85 242 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 PCNX1Q96RV3 2341 aa11.97□□□□□ -0.49
NIPAL3-206ENST00000475663 EXPH5Q8NEV8 1989 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 A0A0G2JNJ9 132 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 SHISA8B8ZZ34 492 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 ANKRD28O15084 1053 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 CBR3O75828 277 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 KCNK2O95069 426 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 KCNH1O95259 989 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 PRF1P14222 555 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 DPP4P27487 766 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 DGKQP52824 942 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 SLC18A1P54219 525 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 PRR5P85299 388 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 MLC1Q15049 377 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 SPANXN4Q5MJ08 99 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 ATG16L1Q676U5 607 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 VASNQ6EMK4 673 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 TRIM42Q8IWZ5 723 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 EID3Q8N140 333 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 OR2M3Q8NG83 312 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 OR5D16Q8NGK9 328 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 HOXB13Q92826 284 aaPredicted RBP11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 WDYHV1Q96HA8 205 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 KLHDC3Q9BQ90 382 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 BHLHE41Q9C0J9 482 aaPredicted RBP11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 OR2B2Q9GZK3 357 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 ATAD3AQ9NVI7 634 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 TAS2R10Q9NYW0 307 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 COQ3Q9NZJ6 369 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 Q9UFV3 132 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 DNAJC13O75165 2243 aa11.96□□□□□ -0.49
NIPAL3-206ENST00000475663 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 HDAC3O15379 428 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 ZIC3O60481 467 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 WDR1O75083 606 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 TOXO94900 526 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 ANGPTL1O95841 491 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 IFI6P09912 130 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 H2AFXP16104 143 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 DDX5P17844 614 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 IL12AP29459 219 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 SRD5A2P31213 254 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 PRIM2P49643 509 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 POU6F2P78424 691 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 SMU1Q2TAY7 513 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 LSM12Q3MHD2 195 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 VPS26BQ4G0F5 336 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 EXOSC6Q5RKV6 272 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 NAXEQ8NCW5 288 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 OR4A15Q8NGL6 344 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 SFXN2Q96NB2 322 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 OR52B2Q96RD2 323 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 TBL1XR1Q9BZK7 514 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 SERHL2Q9H4I8 314 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 SLCO1B3Q9NPD5 702 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 GPATCH2Q9NW75 528 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 FAM120CQ9NX05 1096 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 MRTO4Q9UKD2 239 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 KLF2Q9Y5W3 355 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 MED12Q93074 2177 aa11.95□□□□□ -0.5
NIPAL3-206ENST00000475663 SCN2BO60939 215 aa11.94□□□□□ -0.5
NIPAL3-206ENST00000475663 SASH3O75995 380 aa11.94□□□□□ -0.5
NIPAL3-206ENST00000475663 SNUPNO95149 360 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-206ENST00000475663 OXSR1O95747 527 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms