RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TBC1D25Q3MII6 688 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 FAM69BQ5VUD6 431 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 FBXW10Q5XX13 1052 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TYW3Q6IPR3 259 aaKnown RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 KIRREL2Q6UWL6 708 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 NPSR1Q6W5P4 371 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 FRRS1Q6ZNA5 592 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 PPP1R32Q7Z5V6 425 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 PRR22Q8IZ63 422 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ADGRG5Q8IZF4 528 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TMEM156Q8N614 296 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TMCO5AQ8N6Q1 288 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 APCDD1LQ8NCL9 501 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 CATSPER1Q8NEC5 780 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 VANGL1Q8TAA9 524 aaPredicted RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 KCNE4Q8WWG9 221 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TMBIM1Q969X1 311 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TAMM41Q96BW9 452 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 EFHD2Q96C19 240 aaPredicted RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TMCO6Q96DC7 493 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 OMA1Q96E52 524 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF354BQ96LW1 612 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF347Q96SE7 839 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 CHID1Q9BWS9 393 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TBL1XR1Q9BZK7 514 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 SLC38A1Q9H2H9 487 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ARMC1Q9NVT9 282 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 SELENONQ9NZV5 590 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 STX18Q9P2W9 335 aaKnown RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 KLK13Q9UKR3 277 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 PPIEQ9UNP9 301 aaKnown RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF443Q9Y2A4 671 aaPredicted RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 DTNAQ9Y4J8 743 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 PCDHGA10Q9Y5H3 936 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 WDR87Q6ZQQ6 2873 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF891A8MT65 544 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 hCG_2039718K7EN88 272 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 GTPBP1O00178 669 aaKnown RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 WWP2O00308 870 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 SYT5O00445 386 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 TO15178 435 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ADAMDEC1O15204 470 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 MFN2O95140 757 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 IL33O95760 270 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CLPSP04118 112 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 FESP07332 822 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 GUSBP08236 651 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CT45A8P0DMV1 189 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CT45A9P0DMV2 189 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 NID1P14543 1247 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 LIFP15018 202 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CD247P20963 164 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ITGA3P26006 1051 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ABCD3P28288 659 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 SSR4P51571 173 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 PNLIPRP2P54317 469 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ATP12AP54707 1039 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 RGS8P57771 180 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 AIMP2Q13155 320 aaKnown RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ATP1A4Q13733 1029 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 TRIP10Q15642 601 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CT45A2Q5DJT8 189 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 JMJD6Q6NYC1 403 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 OPN5Q6U736 354 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 DEF8Q6ZN54 512 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 VTCN1Q7Z7D3 282 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CARM1Q86X55 608 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 CMIPQ8IY22 773 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 DND1Q8IYX4 353 aaKnown RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 PQLC1Q8N2U9 271 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 SLC15A4Q8N697 577 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ICA1LQ8NDH6 482 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF248Q8NDW4 579 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 NFAM1Q8NET5 270 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ASB15Q8WXK1 588 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 THAP4Q8WY91 577 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 NR4A3Q92570 626 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 DIO2Q92813 273 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 HOXB13Q92826 284 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ADIPOR1Q96A54 375 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 EME1Q96AY2 570 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 DUS3LQ96G46 650 aaKnown RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 WDR77Q9BQA1 342 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 SCNM1Q9BWG6 230 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 REEP1Q9H902 201 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 ATP13A2Q9NQ11 1180 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 UBQLN4Q9NRR5 601 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 MYOTQ9UBF9 498 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 SLC35A3Q9Y2D2 325 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 NPFFR2Q9Y5X5 522 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 MRPS18BQ9Y676 258 aaKnown RBP9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 DSPPQ9NZW4 1301 aa9.49□□□□□ -0.89
PRPF38A-202ENST00000474048 NPIPA5A0A0B4J1W7 369 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 OR6C70A6NIJ9 312 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 AGAP5A6NIR3 686 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 NPIPA7E9PJI5 369 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 FCMRO60667 390 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 PPM1BO75688 479 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms