RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 REV1Q9UBZ9 1251 aa16.71■□□□□ 0.27
VARS2-206ENST00000473916 SERTAD3Q9UJW9 196 aa16.71■□□□□ 0.27
VARS2-206ENST00000473916 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 IGHV5-10-1A0A0J9YXX1 117 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 BLACEA4D250 179 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 C17orf105B2RV13 164 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 BRINP1O60477 761 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 CPNE6O95741 557 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 PNLIPP16233 465 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 POU1F1P28069 291 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 KRT20P35900 424 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 IDH2P48735 452 aaKnown RBP16.7■□□□□ 0.26
VARS2-206ENST00000473916 PMS2P3Q13401 168 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 ENTPD8Q5MY95 495 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 MRPL2Q5T653 305 aaKnown RBP16.7■□□□□ 0.26
VARS2-206ENST00000473916 TCEAL6Q6IPX3 200 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 LAPTM4BQ86VI4 370 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 FAM181AQ8N9Y4 354 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 OR4K5Q8NGD3 323 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 TCEAL3Q969E4 200 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 LMF1Q96S06 567 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 DPYSL5Q9BPU6 564 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 OR10A5Q9H207 317 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 FTSJ1Q9UET6 329 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 SMIM31A0A1B0GVY4 71 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 DSCR3O14972 297 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 FBLP22087 321 aaKnown RBP16.7■□□□□ 0.26
VARS2-206ENST00000473916 CHMP24386 653 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 ZNF136P52737 540 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 FUT7Q11130 342 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 TARDBPQ13148 414 aaKnown RBP eCLIP16.7■□□□□ 0.26
VARS2-206ENST00000473916 DSG2Q14126 1118 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 LARS2Q15031 903 aaKnown RBP16.7■□□□□ 0.26
VARS2-206ENST00000473916 PTGES3Q15185 160 aaKnown RBP16.7■□□□□ 0.26
VARS2-206ENST00000473916 CCDC103Q8IW40 242 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 ZNF615Q8N8J6 731 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 SLC38A9Q8NBW4 561 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 ADAMTS16Q8TE57 1224 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 PTPMT1Q8WUK0 201 aaPredicted RBP16.7■□□□□ 0.26
VARS2-206ENST00000473916 ITPAQ9BY32 194 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 LRRN3Q9H3W5 708 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 ZNF304Q9HCX3 659 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 CTSFQ9UBX1 484 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 IFT52Q9Y366 437 aa16.7■□□□□ 0.26
VARS2-206ENST00000473916 GPR179Q6PRD1 2367 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 A0A1B0GX78 115 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 ADAP00813 363 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CCNYL3P0C7X3 344 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CT45A8P0DMV1 189 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CT45A9P0DMV2 189 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 TNNI3P19429 210 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 MMP11P24347 488 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CT45A2Q5DJT8 189 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 ARHGAP40Q5TG30 622 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 SHISA6Q6ZSJ9 500 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 ZER1Q7Z7L7 766 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 NKAIN4Q8IVV8 208 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 PARP8Q8N3A8 854 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 IFI44Q8TCB0 444 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 MVB12AQ96EY5 273 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CCDC74BQ96LY2 380 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 MCHR1Q99705 422 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 ZNF226Q9NYT6 803 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 FBXO4Q9UKT5 387 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CEPT1Q9Y6K0 416 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 A0A087WUU8 490 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 IGKV3D-11A0A0A0MRZ8 115 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 CCDC160A6NGH7 325 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 ARHGAP33O14559 1287 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 PRAMEF2O60811 474 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 OXSR1O95747 527 aaPredicted RBP16.69■□□□□ 0.26
VARS2-206ENST00000473916 THBS1P07996 1170 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 MSL3P1P0C860 447 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 NID1P14543 1247 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 HTR2AP28223 471 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 SMIM11AP58511 58 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 FLYWCH1Q4VC44 716 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 PDZK1Q5T2W1 519 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 PLEKHM3Q6ZWE6 761 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 OR6C1Q96RD1 312 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 UCK2Q9BZX2 261 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 SLC22A11Q9NSA0 550 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 KLHL28Q9NXS3 571 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 ZNF232Q9UNY5 417 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 HSPE1-MOB4S4R3N1 261 aa16.69■□□□□ 0.26
VARS2-206ENST00000473916 GDF9O60383 454 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 CYP7B1O75881 506 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 TP53P04637 393 aaPredicted RBP16.68■□□□□ 0.26
VARS2-206ENST00000473916 DBIP07108 87 aaKnown RBP16.68■□□□□ 0.26
VARS2-206ENST00000473916 SP9P0CG40 484 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 PAX7P23759 505 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 CRISP1P54107 249 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 UGT2B15P54855 530 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 RHAGQ02094 409 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 ZNHIT3Q15649 155 aaPredicted RBP16.68■□□□□ 0.26
VARS2-206ENST00000473916 XAF1Q6GPH4 301 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 COX15Q7KZN9 410 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 SPARTQ8N0X7 666 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 ZNF614Q8N883 585 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms