RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PTPN6P29350 595 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 PTGS2P35354 604 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 RFX3P48380 749 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 TRPC1P48995 793 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 CASP6P55212 293 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 TXNL4AP83876 142 aaKnown RBP13.96□□□□□ -0.17
SDC3-203ENST00000471567 HSF1Q00613 529 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 C4orf17Q53FE4 359 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 BLOC1S3Q6QNY0 202 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 ZNF621Q6ZSS3 439 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 FUNDC1Q8IVP5 155 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 CLEC4FQ8N1N0 589 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 WDSUB1Q8N9V3 476 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 RELTQ969Z4 430 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 OTUB1Q96FW1 271 aaPredicted RBP13.96□□□□□ -0.17
SDC3-203ENST00000471567 ITCHQ96J02 903 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 GNRHR2Q96P88 292 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 PHF12Q96QT6 1004 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 INPP5KQ9BT40 448 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 SERHLQ9NQF3 203 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 SLC5A6Q9Y289 635 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 TRGV5A0A0B4J1U4 118 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 OR14I1A6ND48 311 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 AQP7O14520 342 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 PDE9AO76083 593 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 HPNP05981 417 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 CELA3AP09093 270 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 ABOP16442 354 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 NCF2P19878 526 aaPredicted RBP13.95□□□□□ -0.18
SDC3-203ENST00000471567 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 TBXA2RP21731 343 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 GDF1P27539 372 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 CHI3L1P36222 383 aaPredicted RBP13.95□□□□□ -0.18
SDC3-203ENST00000471567 CDKN2CP42773 168 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 CA7P43166 264 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 MAGEA8P43361 318 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 ANXA11P50995 505 aaKnown RBP13.95□□□□□ -0.18
SDC3-203ENST00000471567 SRSF1Q07955 248 aaKnown RBP eCLIP13.95□□□□□ -0.18
SDC3-203ENST00000471567 UBAP2LQ14157 1087 aaKnown RBP13.95□□□□□ -0.18
SDC3-203ENST00000471567 RCAN2Q14206 197 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 GRAMD1BQ3KR37 738 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 TIGD2Q4W5G0 525 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 DCST2Q5T1A1 773 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 FIGNL1Q6PIW4 674 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 FGD2Q7Z6J4 655 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 PLCZ1Q86YW0 608 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 CHDHQ8NE62 594 aaPredicted RBP13.95□□□□□ -0.18
SDC3-203ENST00000471567 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 TMEM120AQ9BXJ8 343 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 HOXD1Q9GZZ0 328 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 SERHL2Q9H4I8 314 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 LDAHQ9H6V9 325 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 MRGBPQ9NV56 204 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 EXD2Q9NVH0 621 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 FLRT3Q9NZU0 649 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 KCNE3Q9Y6H6 103 aa13.95□□□□□ -0.18
SDC3-203ENST00000471567 HIVEP3Q5T1R4 2406 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 TRGV8A0A0C4DH27 118 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 ALG1L2C9J202 215 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 PRRG2O14669 202 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 ADAM10O14672 748 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 KRT75O95678 551 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 KHKP50053 298 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 ARFIP2P53365 341 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 RPS26P62854 115 aaKnown RBP13.94□□□□□ -0.18
SDC3-203ENST00000471567 AGKQ53H12 422 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 CCNJQ5T5M9 372 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 OR5D16Q8NGK9 328 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 OR4C3Q8NH37 302 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 GTF2H4Q92759 462 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 VPS33AQ96AX1 596 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 SPDL1Q96EA4 605 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 ZNF317Q96PQ6 595 aaPredicted RBP13.94□□□□□ -0.18
SDC3-203ENST00000471567 SDF2Q99470 211 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 TBL1XR1Q9BZK7 514 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 OR51I1Q9H343 314 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 ZNF385DQ9H6B1 395 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 FBXO34Q9NWN3 711 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 CCDC167Q9P0B6 97 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 PPP4R1LQ9P1A2 415 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 MRPS18CQ9Y3D5 142 aaKnown RBP13.94□□□□□ -0.18
SDC3-203ENST00000471567 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
SDC3-203ENST00000471567 GTF3C1Q12789 2109 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 TENM4Q6N022 2769 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ZNF407Q9C0G0 2248 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 IGLV3-32A0A0A0MS00 114 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 A0A1W2PQD3 144 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 BCKDKO14874 412 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 LRRTM2O43300 516 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 SCO2O43819 266 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 SEMA7AO75326 666 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 TRAPPC6AO75865 159 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 AGFG2O95081 481 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ANP32DO95626 131 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
SDC3-203ENST00000471567 GSNP06396 782 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 GUSBP08236 651 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 HPGDP15428 266 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms