RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 FAM86B1Q8N7N1 296 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 OR5K1Q8NHB7 308 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 KCNC2Q96PR1 638 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 ERVK-11Q9UQG0 969 aa16.3■□□□□ 0.2
MRPL28-208ENST00000469744 CLDN4O14493 209 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 WISP2O76076 250 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 CST1P01037 141 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ATP5A1P25705 553 aaKnown RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 TPP2P29144 1249 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 KDELR2P33947 212 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 PCGF2P35227 344 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 HSD17B7P56937 341 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 TUBA4AP68366 448 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 TGM3Q08188 693 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 RBBP4Q09028 425 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 USP51Q70EK9 711 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 CBLL1Q75N03 491 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 EIF3MQ7L2H7 374 aaKnown RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ACOT4Q8N9L9 421 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 APCDD1LQ8NCL9 501 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 OR4A15Q8NGL6 344 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 C5orf34Q96MH7 638 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 DEFB126Q9BYW3 111 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 TUBA8Q9NY65 449 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 KCMF1Q9P0J7 381 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 PLEKHB1Q9UF11 243 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 MRPS33Q9Y291 106 aaKnown RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 PCDHGB5Q9Y5G0 923 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 UNC79Q9P2D8 2635 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 TRIM64A6NGJ6 449 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 G3V2T6 193 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 SEMG1P04279 462 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ALPLP05186 524 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 KLK1P06870 262 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 SSR2P43308 183 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ARFIP1P53367 373 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 NR1H2P55055 460 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 TRA2BP62995 288 aaKnown RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ID2Q02363 134 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 CYBRD1Q53TN4 286 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF385BQ569K4 471 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 FOXB2Q5VYV0 432 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ANKRD26P1Q6NSI1 321 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 PATL1Q86TB9 770 aaKnown RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 HIPK1Q86Z02 1210 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 B3GNT7Q8NFL0 401 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 OR52N2Q8NGI0 321 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 RMND5BQ96G75 393 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 LRFN1Q9P244 771 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 ZNF223Q9UK11 482 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-208ENST00000469744 FBXW2Q9UKT8 454 aa16.29■□□□□ 0.2
MRPL28-208ENST00000469744 LRRTM2O43300 516 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 LDB3O75112 727 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 NEURL1O76050 574 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 DDAH2O95865 285 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 MT-ND1P03886 318 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 IFNA16P05015 189 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 TFAP2AP05549 437 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 HIST1H1TP22492 207 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-208ENST00000469744 MLF1P58340 268 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 FADDQ13158 208 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 RGNQ15493 299 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 TMEM35AQ53FP2 167 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 TBPL2Q6SJ96 375 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 GFRALQ6UXV0 394 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 PIWIL3Q7Z3Z3 882 aaKnown RBP16.28■□□□□ 0.2
MRPL28-208ENST00000469744 LGI4Q8N135 537 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 SRFBP1Q8NEF9 429 aaKnown RBP16.28■□□□□ 0.2
MRPL28-208ENST00000469744 TSPAN14Q8NG11 270 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 RBM4BQ9BQ04 359 aaKnown RBP16.28■□□□□ 0.2
MRPL28-208ENST00000469744 RBM4Q9BWF3 364 aaKnown RBP16.28■□□□□ 0.2
MRPL28-208ENST00000469744 TSPAN10Q9H1Z9 355 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-208ENST00000469744 ADAP2Q9NPF8 381 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 IL1RAPQ9NPH3 570 aa16.28■□□□□ 0.2
MRPL28-208ENST00000469744 MYO7BQ6PIF6 2116 aa16.27■□□□□ 0.2
MRPL28-208ENST00000469744 NUP214P35658 2090 aaPredicted RBP16.27■□□□□ 0.19
MRPL28-208ENST00000469744 TRIM64CA6NLI5 447 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 PLOD2O00469 737 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 PLPP1O14494 284 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 GNGT2O14610 69 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 KRT75O95678 551 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 CRYABP02511 175 aaKnown RBP16.27■□□□□ 0.19
MRPL28-208ENST00000469744 THRBP10828 461 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 CD46P15529 392 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 BSGP35613 385 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 RFX4Q33E94 735 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 C4orf17Q53FE4 359 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 CCNYL2Q5T2Q4 361 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 C1QL3Q5VWW1 255 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 C16orf47Q6ZP98 133 aaPredicted RBP16.27■□□□□ 0.19
MRPL28-208ENST00000469744 GALNTL5Q7Z4T8 443 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 STK32CQ86UX6 486 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 SLC30A8Q8IWU4 369 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 C11orf65Q8NCR3 313 aa16.27■□□□□ 0.19
MRPL28-208ENST00000469744 RGMAQ96B86 450 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms