RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, human

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC16A-208	ENST00000467838	HMGN2P46	Q86SG4	172 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC37A3	Q8NCC5	494 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	BBS1	Q8NFJ9	593 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR4M2	Q8NGB6	313 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR5H6	Q8NGV6	325 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	CXorf40A	Q8TE69	158 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	BAD	Q92934	168 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	OTUB1	Q96FW1	271 aa	Predicted RBP	13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	GPR137	Q96N19	417 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	BBS4	Q96RK4	519 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRR14	Q9BWN1	585 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	STMN3	Q9NZ72	180 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	PTTG3P	Q9NZH4	202 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC23A2	Q9UGH3	650 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	HSPB11	Q9Y547	144 aa		13.57	□□□□□ -0.24
SEC16A-208	ENST00000467838	IGKV1-8	A0A0C4DH67	115 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	C2orf92	A0A1B0GVN3	265 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	PPM1D	O15297	605 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CHP2	O43745	196 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	LZTS3	O60299	673 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR5F1	O95221	314 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	HMGN1	P05114	100 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	TRHR	P34981	398 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	DUSP2	Q05923	314 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	MRPL28	Q13084	256 aa	Known RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CEP78	Q5JTW2	689 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZNF57	Q68EA5	555 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	WASH2P	Q6VEQ5	465 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	MBOAT2	Q6ZWT7	520 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	GID4	Q8IVV7	300 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	SIRT6	Q8N6T7	355 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	LINC01555	Q8NAE3	123 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CNRIP1	Q96F85	164 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	SCMH1	Q96GD3	660 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR7D2	Q96RA2	312 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	TIMP4	Q99727	224 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	C17orf62	Q9BQA9	187 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	WAC	Q9BTA9	647 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	QRSL1	Q9H0R6	528 aa	Known RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	HINT3	Q9NQE9	182 aa	Known RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	TNFRSF10D	Q9UBN6	386 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CES1P1	Q9UKY3	287 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC27A6	Q9Y2P4	619 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	AUP1	Q9Y679	476 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	KCNE3	Q9Y6H6	103 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	RNF215	Q9Y6U7	377 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	PTPRS	Q13332	1948 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CPSF4L	A6NMK7	179 aa	Known RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	EMC8	O43402	210 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	FGF18	O76093	207 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	THY1	P04216	161 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	TFPI	P10646	304 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	IFNA8	P32881	189 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	ST8SIA6	P61647	398 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRR5	P85299	388 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CSTF1	Q05048	431 aa	Known RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	UAP1L1	Q3KQV9	507 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	PIP5KL1	Q5T9C9	394 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	OAF	Q86UD1	273 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	LRRTM4	Q86VH4	590 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	VRK2	Q86Y07	508 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	KLB	Q86Z14	1044 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	CCDC28A	Q8IWP9	274 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	C7orf61	Q8IZ16	206 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR2T33	Q8NG76	320 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	RFT1	Q96AA3	541 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	C16orf58	Q96GQ5	468 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	NECTIN4	Q96NY8	510 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	YIPF4	Q9BSR8	244 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	FN3K	Q9H479	309 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	OSGEPL1	Q9H4B0	414 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	EMC7	Q9NPA0	242 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	KLF15	Q9UIH9	416 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC13A4	Q9UKG4	626 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRKAB1	Q9Y478	270 aa		13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC16A-208	ENST00000467838		A0A1W2PR48	441 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	C12orf71	A8MTZ7	269 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	C4orf51	C9J302	202 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	SMLR1	H3BR10	107 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	DVL2	O14641	736 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	FRS3	O43559	492 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ICMT	O60725	284 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRKRA	O75569	313 aa	Known RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZIC2	O95409	532 aa	Predicted RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	NTN1	O95631	604 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	NPR2	P20594	1047 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	SNRPD2	P62316	118 aa	Known RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	MLLT1	Q03111	559 aa	Predicted RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC9A5	Q14940	896 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ESCO2	Q56NI9	601 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	C9orf64	Q5T6V5	341 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZBTB37	Q5TC79	503 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	SDE2	Q6IQ49	451 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	NIPAL3	Q6P499	406 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ADCK2	Q7Z695	626 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	NKAIN4	Q8IVV8	208 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	BRIX1	Q8TDN6	353 aa	Known RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	OR8D1	Q8WZ84	308 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	AHCYL2	Q96HN2	611 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms