RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PCDHB14Q9Y5E9 798 aa9.21□□□□□ -0.94
ATG4A-206ENST00000457035 FLNCQ14315 2725 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 PTPN13Q12923 2485 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 DUXAA6NLW8 204 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 NR5A2O00482 541 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 FADS1O60427 444 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SNX3O60493 162 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 ICOSLGO75144 302 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SNX4O95219 450 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 KCNH1O95259 989 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 CBX6O95503 412 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 KRT16P08779 473 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 IL12BP29460 328 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 ADSLP30566 484 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 KRT20P35900 424 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 RFC3P40938 356 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 TDGF1P3P51864 188 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 MVDP53602 400 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 GAS1P54826 345 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 PSMD4P55036 377 aaKnown RBP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 RPP38P78345 283 aaKnown RBP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 POU6F2P78424 691 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SRSF1Q07955 248 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SNTA1Q13424 505 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 GTDC1Q4AE62 458 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 TBCELQ5QJ74 424 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 LRIF1Q5T3J3 769 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SLC30A6Q6NXT4 461 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 FIGNL1Q6PIW4 674 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 FAM180AQ6UWF9 173 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 DLEU7Q6UYE1 221 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 GK5Q6ZS86 529 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SPATA21Q7Z572 469 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 PIGWQ7Z7B1 504 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 CPLX4Q7Z7G2 160 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 RNF130Q86XS8 419 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 TRIML2Q8N7C3 387 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 COX18Q8N8Q8 333 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 OR5D16Q8NGK9 328 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 JADE3Q92613 823 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 CDS1Q92903 461 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SLC35G5Q96KT7 338 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SDF2Q99470 211 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 NMUR2Q9GZQ4 415 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 OR51I1Q9H343 314 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 TPT1P8Q9HAU6 139 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 IL1RL2Q9HB29 575 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 OLAHQ9NV23 265 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 FLRT3Q9NZU0 649 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 MRTO4Q9UKD2 239 aaKnown RBP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 PCDHGB3Q9Y5G1 929 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.2□□□□□ -0.94
ATG4A-206ENST00000457035 COL12A1Q99715 3063 aa9.2□□□□□ -0.94
ATG4A-206ENST00000457035 NAV2Q8IVL1 2488 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 A0A096LPI6 279 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 TRBV5-3A0A0A0MS03 114 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 PRAMEF27A3QJZ7 478 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 LRRC3CA6NJW4 275 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 UNC5CO95185 931 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 UTS2O95399 124 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 KRT75O95678 551 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 SNRPB2P08579 225 aaKnown RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 RFPL3SP0C7P2 107 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 OR12D1P0DN82 309 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 LCN1P31025 176 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 CHI3L1P36222 383 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 PPIAP62937 165 aaKnown RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 KLF10Q13118 480 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 UBAP2LQ14157 1087 aaKnown RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 ARHGAP11BQ3KRB8 267 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 COX20Q5RI15 118 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 C6orf10Q5SRN2 563 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 CCNJQ5T5M9 372 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 HEPHL1Q6MZM0 1159 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 TNFAIP8L2Q6P589 184 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 APOOLQ6UXV4 268 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 GALNT10Q86SR1 603 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 DPP10Q8N608 796 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 WDSUB1Q8N9V3 476 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 GALNT11Q8NCW6 608 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 CHDHQ8NE62 594 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-206ENST00000457035 OR52N2Q8NGI0 321 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 OR4C3Q8NH37 302 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 XAGE5Q8WWM1 108 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 RAB8BQ92930 207 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 TMEM41AQ96HV5 264 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 DOHHQ9BU89 302 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 TTTY12Q9BZ98 90 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 RTN4RQ9BZR6 473 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 FAM107BQ9H098 131 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 METTL7AQ9H8H3 244 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 ZDHHC11Q9H8X9 412 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 GALNT9Q9HCQ5 603 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 ZFP64Q9NPA5 681 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 MRGBPQ9NV56 204 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 SLC25A37Q9NYZ2 338 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms