RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CARD8Q9Y2G2 431 aa17.17■□□□□ 0.34
SEMA3B-209ENST00000456560 IRGMA1A4Y4 181 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 IDH3BO43837 385 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 SSX4O60224 188 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 TNFSF8P32971 234 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 STAT5AP42229 794 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 RGS8P57771 180 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 BNC1Q01954 994 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 ARHGAP11BQ3KRB8 267 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 PUS10Q3MIT2 529 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 MINDY4Q4G0A6 757 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 DEFB134Q4QY38 66 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 TYW3Q6IPR3 259 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 USP53Q70EK8 1073 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 GDF7Q7Z4P5 450 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 OR9Q1Q8NGQ5 310 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 ZCCHC10Q8TBK6 192 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 CEP19Q96LK0 163 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 MCHR1Q99705 422 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 TMEM74BQ9NUR3 256 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF221Q9UK13 617 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 DAPP1Q9UN19 280 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 SSR3Q9UNL2 185 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF443Q9Y2A4 671 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 TNFRSF10CO14798 259 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 OR5F1O95221 314 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 FPR3P25089 353 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 IFNA8P32881 189 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 OR2B6P58173 313 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 SIM1P81133 766 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 FIGLAQ6QHK4 219 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 NANOGNBQ7Z5D8 188 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 OR4N5Q8IXE1 308 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 ANKK1Q8NFD2 765 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 COL26A1Q96A83 441 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 MRGPRX1Q96LB2 322 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC38A2Q96QD8 506 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 C14orf119Q9NWQ9 140 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 TRAPPC4Q9Y296 219 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 GPR52Q9Y2T5 361 aa17.16■□□□□ 0.34
SEMA3B-209ENST00000456560 TMEM129A0AVI4 362 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 AP3D1O14617 1153 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 B3GALT2O43825 422 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 RASGRP1O95267 797 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ACSL1P33121 698 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 RORCP51449 518 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 EXOSC6Q5RKV6 272 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 PLEKHM3Q6ZWE6 761 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 FLCNQ8NFG4 579 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC9A6Q92581 669 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC41A3Q96GZ6 507 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC30A2Q9BRI3 323 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ISYNA1Q9NPH2 558 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ERVK13-1Q9NX77 482 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 PTGFRNQ9P2B2 879 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC22A7Q9Y694 548 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 A6NL46 340 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 SNTNA6NMZ2 147 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 CPMP14384 443 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 HNRNPA2B1P22626 353 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 WNT4P56705 351 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ADAM15Q13444 863 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 DUSP5Q16690 384 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 FHL5Q5TD97 284 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF544Q6NX49 715 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF836Q6ZNA1 936 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 RRM2BQ7LG56 351 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 POGLUT1Q8NBL1 392 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 OR4Q3Q8NH05 313 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 OR2B2Q9GZK3 357 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 NDEL1Q9GZM8 345 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 TTYH1Q9H313 450 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 MARCH7Q9H992 704 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 TXNL4BQ9NX01 149 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 IL20Q9NYY1 176 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 ACTR10Q9NZ32 417 aa17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 COLQQ9Y215 455 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-209ENST00000456560 LOC105369274A0A096LPK9 316 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 LOC102723532A0A0G2JNH3 316 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 URADA6NGE7 173 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 STK25O00506 426 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 GNSP15586 552 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 MYL12AP19105 171 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 POLR2CP19387 275 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 TLX1P31314 330 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 MTNR1AP48039 350 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 SRP54P61011 504 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 DLX2Q07687 328 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 TPBGQ13641 420 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 ALG11Q2TAA5 492 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF628Q5EBL2 1059 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 MBOAT2Q6ZWT7 520 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 OR4N4Q8N0Y3 316 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 OR8H2Q8N162 312 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 TM9SF4Q92544 642 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 OSTF1Q92882 214 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 SDF2Q99470 211 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 CCDC32Q9BV29 185 aa17.14■□□□□ 0.33
SEMA3B-209ENST00000456560 SNTG1Q9NSN8 517 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms