RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 A0A1W2PQ09 198 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 OR2A25A4D2G3 310 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 HRO43593 1189 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4L2P0CJ85 424 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4L3P0CJ86 424 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4L4P0CJ87 422 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4L5P0CJ88 424 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4L6P0CJ89 424 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4L7P0CJ90 424 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 ARAFP10398 606 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 HSD3B1P14060 373 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 HSD3B2P26439 372 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 APEX1P27695 318 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 LRIT3Q3SXY7 679 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 FAM71E1Q6IPT2 247 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 LAIR2Q6ISS4 152 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 TCTN3Q6NUS6 607 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 FGD2Q7Z6J4 655 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 CALHM3Q86XJ0 350 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 NKAIN4Q8IVV8 208 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 SFTPA2Q8IWL1 248 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 SIMC1Q8NDZ2 872 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 WFIKKN2Q8TEU8 576 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 SNX33Q8WV41 574 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 FRMD6Q96NE9 622 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 LMAN2LQ9H0V9 348 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 MED28Q9H204 178 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DDX31Q9H8H2 851 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 BRF2Q9HAW0 419 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 DUX4Q9UBX2 424 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 PLCL2Q9UPR0 1127 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 COLEC10Q9Y6Z7 277 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 GTPBP1O00178 669 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 PIP5K1CO60331 668 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 GPX5O75715 221 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 MTNR1AP48039 350 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 NOXA1Q86UR1 476 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 FBXL6Q8N531 539 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 OR4K13Q8NH42 304 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 ST8SIA2Q92186 375 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 SLC25A36Q96CQ1 311 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 EPYCQ99645 322 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 C1QTNF7Q9BXJ2 289 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 RANGRFQ9HD47 186 aaPredicted RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 EIF3KQ9UBQ5 218 aaKnown RBP10.5□□□□□ -0.73
DDR1-240ENST00000454612 SLC7A7Q9UM01 511 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 EDARQ9UNE0 448 aa10.5□□□□□ -0.73
DDR1-240ENST00000454612 M0R082 166 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 GREM1O60565 184 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 UPK1BO75841 260 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 MMP11P24347 488 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 MYL9P24844 172 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SOX18P35713 384 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 HCCSP53701 268 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 RBBP4Q09028 425 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 RPA4Q13156 261 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 PRSS53Q2L4Q9 553 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 FRRS1Q6ZNA5 592 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 TECPR1Q7Z6L1 1165 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 PDZD3Q86UT5 571 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 OR4C6Q8NH72 309 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 MND1Q9BWT6 205 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 GPATCH2Q9NW75 528 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 MGAT4BQ9UQ53 548 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ANKRD61A6NGH8 418 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 B3GALT2O43825 422 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 DOK2O60496 412 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SLITRK5O94991 958 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 AIFM1O95831 613 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 S100A6P06703 90 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 PRKAR1AP10644 381 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 CPMP14384 443 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ITGB7P26010 798 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ACADLP28330 430 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 PBX2P40425 430 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 RPS25P62851 125 aaKnown RBP10.49□□□□□ -0.73
DDR1-240ENST00000454612 FGFBP1Q14512 234 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 PUM1Q14671 1186 aaKnown RBP eCLIP10.49□□□□□ -0.73
DDR1-240ENST00000454612 MPEG1Q2M385 716 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SYT6Q5T7P8 510 aaPredicted RBP10.49□□□□□ -0.73
DDR1-240ENST00000454612 SHISA6Q6ZSJ9 500 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SERPINA12Q8IW75 414 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 OR6C4Q8NGE1 309 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ORAI1Q96D31 301 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 PTCHD1Q96NR3 888 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ATP13A2Q9NQ11 1180 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ADAM30Q9UKF2 790 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 NUP50Q9UKX7 468 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SGK494L7N484 410 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 SOCS6O14544 535 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 BCL6P41182 706 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.49□□□□□ -0.73
DDR1-240ENST00000454612 ST3GAL3Q11203 375 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 GGTA1PQ4G0N0 100 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 TMEM64Q6YI46 380 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 BEST4Q8NFU0 473 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms