RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LINC00303Q3SY05 128 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 TYW3Q6IPR3 259 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 TUBA3EQ6PEY2 450 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 LRRC74BQ6ZQY2 392 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 HGDQ93099 445 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 SMAD5Q99717 465 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 UTP23Q9BRU9 249 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 CADM1Q9BY67 442 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZNF350Q9GZX5 532 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 CD300AQ9UGN4 299 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 MRTO4Q9UKD2 239 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 PRPF19Q9UMS4 504 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 ELOVL7A1L3X0 281 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 OR6C70A6NIJ9 312 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 MKRN2OSH3BPM6 223 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 GSC2O15499 205 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 ABCB7O75027 752 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 DNAJC8O75937 253 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 PDGFAP04085 211 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 ITGB2P05107 769 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 NAGAP17050 411 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 TMED10P49755 219 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 CRISP3P54108 245 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 PNLIPRP2P54317 469 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 PSMD4P55036 377 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 PSPHP78330 225 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 RBBP4Q09028 425 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 GRAMD1BQ3KR37 738 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 FLYWCH1Q4VC44 716 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 REEP3Q6NUK4 255 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZNF227Q86WZ6 799 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 HIPK4Q8NE63 616 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 SIGLEC12Q96PQ1 595 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 NODALQ96S42 347 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 G6PC3Q9BUM1 346 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 QRSL1Q9H0R6 528 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 LRMDAQ9H2I8 198 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 EGFL7Q9UHF1 273 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 ANGPT4Q9Y264 503 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 PCDHGA9Q9Y5G4 932 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 CSAG2Q9Y5P2 127 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 HEATR5AQ86XA9 2040 aa16.53■□□□□ 0.24
TRAPPC4-203ENST00000447216 FREM3P0C091 2139 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 CENPVL1A0A0U1RR11 272 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ERICH4A6NGS2 130 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 KIAA0513O60268 411 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 PGM3O95394 542 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 FAM87AP0C7U9 286 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 HSD17B1P14061 328 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 NCK1P16333 377 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 PGM1P36871 562 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 CASRP41180 1078 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 CYB561P49447 251 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ARG2P78540 354 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 EFR3AQ14156 821 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 BICRALQ6AI39 1079 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ERICH5Q6P6B1 374 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 IGFL2Q6UWQ7 119 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ASRGL1Q7L266 308 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 NUP54Q7Z3B4 507 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 MDGA2Q7Z553 956 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZNF619Q8N2I2 560 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 OR4C3Q8NH37 302 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZG16BQ96DA0 208 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 TREX2Q9BQ50 279 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 SAP130Q9H0E3 1048 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 CALML5Q9NZT1 146 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 LRFN1Q9P244 771 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 KCNE5Q9UJ90 142 aa16.52■□□□□ 0.24
TRAPPC4-203ENST00000447216 OR5H15A6NDH6 313 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 G3V3Y1 287 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 GSTA4O15217 222 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 HS6ST1O60243 411 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 DNAJA2O60884 412 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 GCM2O75603 506 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 OXSR1O95747 527 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 CCL3P10147 92 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 DCTP40126 519 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 CD97P48960 835 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 GNA13Q14344 377 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 OR1C1Q15619 314 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 SPINK14Q6IE38 97 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 RTL4Q6ZR62 310 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 HPS6Q86YV9 775 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 GPALPP1Q8IXQ4 340 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 METTL25Q8N6Q8 603 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 CATSPER1Q8NEC5 780 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 BBS10Q8TAM1 723 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 SPPL2AQ8TCT8 520 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 ARHGAP9Q9BRR9 750 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 HES7Q9BYE0 225 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 RNF32Q9H0A6 362 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 PCDHAC1Q9H158 963 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 POLE3Q9NRF9 147 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 TP53TG5Q9Y2B4 290 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 PCDHGA10Q9Y5H3 936 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 CHCHD2Q9Y6H1 151 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 PIEZO2Q9H5I5 2752 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms