RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 SEMA6CQ9H3T2 930 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 GDF1P27539 372 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 OR4N5Q8IXE1 308 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 MMP21Q8N119 569 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 MS4A15Q8N5U1 240 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 RHBDF1Q96CC6 855 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 FUZQ9BT04 418 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 OPA3Q9H6K4 179 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 RACK1P63244 317 aaKnown RBP11.09□□□□□ -0.63
FN1-212ENST00000446046 ANKRD54Q6NXT1 300 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 KDM1BQ8NB78 822 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 SLC41A3Q96GZ6 507 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
FN1-212ENST00000446046 DIDO1Q9BTC0 2240 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 MTHFD2P13995 350 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 EEF1A1P68104 462 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 CRTC1Q6UUV9 634 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 HACD2Q6Y1H2 254 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 OR8J1Q8NGP2 316 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 FAM46BQ96A09 425 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 UBQLN4Q9NRR5 601 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 MRPS2Q9Y399 296 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 DICER1Q9UPY3 1922 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 RNASET2O00584 256 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 C1orf105O95561 183 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 FDXRP22570 491 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 MMP12P39900 470 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ZNF45Q02386 682 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 NKAPLQ5M9Q1 402 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 XKRXQ6PP77 449 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 PXKQ7Z7A4 578 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 NUMBLQ9Y6R0 609 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SYT7O43581 403 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 UCHL1P09936 223 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 EIF2S3LQ2VIR3 472 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 FAM26DQ5JW98 314 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 AWAT2Q6E213 333 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SNX29P2Q8IUI4 249 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 OR51A7Q8NH64 312 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 OR5K2Q8NHB8 316 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 JPH3Q8WXH2 748 aaPredicted RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 SPIN2AQ99865 258 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SPIN2BQ9BPZ2 258 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SPHK1Q9NYA1 384 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ZNF226Q9NYT6 803 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 WNT11O96014 354 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 S100PP25815 95 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 PCGF2P35227 344 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 OR1E2P47887 323 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 RGS19P49795 217 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 INHBCP55103 352 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 DBPQ10586 325 aaPredicted RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 STK11Q15831 433 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ZNF517Q6ZMY9 492 aaPredicted RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 MINDY1Q8N5J2 469 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 HS3ST3A1Q9Y663 406 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ABCA3Q99758 1704 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SCRG1O75711 98 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 TCN2P20062 427 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 PRLHRP49683 370 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 CYCSP99999 105 aaKnown RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 ATP6AP1Q15904 470 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ATAD3CQ5T2N8 411 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 LEG1Q6P5S2 330 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SYNPOQ8N3V7 929 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 PADI1Q9ULC6 663 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ZNF337Q9Y3M9 751 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 TMEM233B4DJY2 109 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 IGHG1P01857 330 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 LCN1P31025 176 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 XCR1P46094 333 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 SOX4Q06945 474 aaPredicted RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 SLX4IPQ5VYV7 408 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ZNF420Q8TAQ5 688 aaPredicted RBP11.08□□□□□ -0.64
FN1-212ENST00000446046 DMRT3Q9NQL9 472 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 IL20RAQ9UHF4 553 aa11.08□□□□□ -0.64
FN1-212ENST00000446046 ANHXE9PGG2 379 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 NDUFB2O95178 105 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 FAM78AQ5JUQ0 283 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 WBP2NLQ6ICG8 309 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 CHST14Q8NCH0 376 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 SYT4Q9H2B2 425 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 PLEKHA3Q9HB20 300 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 ZNF554Q86TJ5 538 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 ADIPOR2Q86V24 386 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 BORCS6Q96GS4 357 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 RNF6Q9Y252 685 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 SLC22A7Q9Y694 548 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 LRRC30A6NM36 301 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 H3BML4 177 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 HCRTO43612 131 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 SLC16A8O95907 504 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 HK3P52790 923 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 TRIM46Q7Z4K8 759 aa11.07□□□□□ -0.64
FN1-212ENST00000446046 FOXRED2Q8IWF2 684 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms