RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PTPN6P29350 595 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 PTGS2P35354 604 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 CHI3L1P36222 383 aaPredicted RBP10.79□□□□□ -0.68
HSPG2-206ENST00000439717 MAGEA8P43361 318 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 TRPC1P48995 793 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 CASP6P55212 293 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 HSF1Q00613 529 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 TIGD2Q4W5G0 525 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 C4orf17Q53FE4 359 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 FIGNL1Q6PIW4 674 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 BLOC1S3Q6QNY0 202 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 ZNF621Q6ZSS3 439 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 TRILQ7L0X0 811 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 PLCZ1Q86YW0 608 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 CHERPQ8IWX8 916 aaKnown RBP10.79□□□□□ -0.68
HSPG2-206ENST00000439717 CLEC4FQ8N1N0 589 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 WDSUB1Q8N9V3 476 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 RELTQ969Z4 430 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 OTUB1Q96FW1 271 aaPredicted RBP10.79□□□□□ -0.68
HSPG2-206ENST00000439717 GNRHR2Q96P88 292 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 INPP5KQ9BT40 448 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 TBL1XR1Q9BZK7 514 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 LDAHQ9H6V9 325 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 SERHLQ9NQF3 203 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 UBQLN4Q9NRR5 601 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 EXD2Q9NVH0 621 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 CCDC167Q9P0B6 97 aa10.79□□□□□ -0.68
HSPG2-206ENST00000439717 EML6Q6ZMW3 1958 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 FASNP49327 2511 aaKnown RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 C2orf72A6NCS6 295 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ALG1L2C9J202 215 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 PRRG2O14669 202 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ADAM10O14672 748 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 BCKDKO14874 412 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 TRAPPC6AO75865 159 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 KRT75O95678 551 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 GUSBP08236 651 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 CELA3AP09093 270 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 NCF2P19878 526 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ATP6V1C1P21283 382 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 CDKN2CP42773 168 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 CA7P43166 264 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 KHKP50053 298 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ANXA11P50995 505 aaKnown RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ARFIP2P53365 341 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 RPS26P62854 115 aaKnown RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 UBAP2LQ14157 1087 aaKnown RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 GRAMD1BQ3KR37 738 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 DCST2Q5T1A1 773 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ATAD3BQ5T9A4 648 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 FGD2Q7Z6J4 655 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 FUNDC1Q8IVP5 155 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 CHDHQ8NE62 594 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 OR5D16Q8NGK9 328 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 FAM57AQ8TBR7 257 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 VPS33AQ96AX1 596 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 SPDL1Q96EA4 605 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ZNF317Q96PQ6 595 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 TMEM120AQ9BXJ8 343 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 HOXD1Q9GZZ0 328 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 OR51I1Q9H343 314 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 SERHL2Q9H4I8 314 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 ZNF385DQ9H6B1 395 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 FLRT3Q9NZU0 649 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 PPP4R1LQ9P1A2 415 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 MRPS18CQ9Y3D5 142 aaKnown RBP10.78□□□□□ -0.68
HSPG2-206ENST00000439717 LIPGQ9Y5X9 500 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 KCNE3Q9Y6H6 103 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 RELNP78509 3460 aa10.78□□□□□ -0.68
HSPG2-206ENST00000439717 IGLV3-32A0A0A0MS00 114 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 TRGV8A0A0C4DH27 118 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 A0A1W2PQD3 144 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 SCDO00767 359 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 LRRTM2O43300 516 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 SCO2O43819 266 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 SEMA7AO75326 666 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 AGFG2O95081 481 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 ANP32DO95626 131 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 OXSR1O95747 527 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-206ENST00000439717 GSNP06396 782 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 HPGDP15428 266 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 PER3P56645 1201 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 SRSF1Q07955 248 aaKnown RBP eCLIP10.77□□□□□ -0.69
HSPG2-206ENST00000439717 ARHGAP11BQ3KRB8 267 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 AGKQ53H12 422 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 C6orf10Q5SRN2 563 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 CCNJQ5T5M9 372 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 C1QL3Q5VWW1 255 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 HEPHL1Q6MZM0 1159 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 CGB2Q6NT52 195 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 MTFR2Q6P444 385 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 RNF130Q86XS8 419 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 MISPQ8IVT2 679 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 EID3Q8N140 333 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 FADS6Q8N9I5 356 aa10.77□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF527Q8NB42 609 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms