RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 NDUFAF5Q5TEU4 345 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 LYPLAL1Q5VWZ2 237 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 CEACAM19Q7Z692 300 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 CFAP206Q8IYR0 622 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 KRT78Q8N1N4 520 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 SORCS1Q8WY21 1168 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 TMEM169Q96HH4 297 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 SYT17Q9BSW7 474 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 HCAR1Q9BXC0 346 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 LIN7BQ9HAP6 207 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 TEX10Q9NXF1 929 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-204ENST00000438964 HRH3Q9Y5N1 445 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 AUP1Q9Y679 476 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 A8MVJ9 347 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 MID1O15344 667 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 TPPPO94811 219 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 ATP5A1P25705 553 aaKnown RBP12.55□□□□□ -0.4
ACTN1-204ENST00000438964 SPINT3P49223 89 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 TAS2R41P59536 307 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 CDK5Q00535 292 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 RIN1Q13671 783 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 METTL2BQ6P1Q9 378 aaKnown RBP12.55□□□□□ -0.4
ACTN1-204ENST00000438964 SFXN4Q6P4A7 337 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 FUT10Q6P4F1 479 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 RRM2BQ7LG56 351 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 NKAIN4Q8IVV8 208 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 CMTM8Q8IZV2 173 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 KLHL36Q8N4N3 616 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 OR52B4Q8NGK2 314 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 PXYLP1Q8TE99 480 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 C2orf49Q9BVC5 232 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-204ENST00000438964 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 CYSLTR2Q9NS75 346 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 KIAA1671Q9BY89 1806 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 LINC01387J3KSC0 135 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 KHNYNO15037 678 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ARPC5O15511 151 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ERAL1O75616 437 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 SOX30O94993 753 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 IGSF6O95976 241 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 TFP02787 698 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CLUP10909 449 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 MAZP56270 477 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 FZD5Q13467 585 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 LASP1Q14847 261 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 OR5M10Q6IEU7 315 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CAMKMTQ7Z624 323 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ADGRG3Q86Y34 549 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 GPALPP1Q8IXQ4 340 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 RASGEF1AQ8N9B8 481 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 RELL2Q8NC24 303 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 OR2AP1Q8NGE2 309 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 GOT1L1Q8NHS2 421 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 SGTBQ96EQ0 304 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 TRMT61BQ9BVS5 477 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 NDOR1Q9UHB4 597 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ADAM30Q9UKF2 790 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 PLXNB3Q9ULL4 1909 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 C7orf66A4D0T2 115 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 RNF13O43567 381 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ATG13O75143 517 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 UBXN7O94888 489 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 RB1P06400 928 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 UQCRC2P22695 453 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CLDN12P56749 244 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 SNTB2Q13425 540 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CD200R1LQ6Q8B3 271 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF485Q8NCK3 441 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 MORN4Q8NDC4 146 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 AUTS2Q8WXX7 1259 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 C16orf58Q96GQ5 468 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ZSWIM3Q96MP5 696 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 SARGQ9BW04 601 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 SUV39H2Q9H5I1 410 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 HINT3Q9NQE9 182 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 MARCH5Q9NX47 278 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 TNFRSF10DQ9UBN6 386 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF69Q9UC07 566 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 CATP04040 527 aaKnown RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 PSMB5P28074 263 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 RAD52P43351 418 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 MAPK9P45984 424 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 BTG1P62324 171 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 DSG2Q14126 1118 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF273Q14593 569 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 FAM110CQ1W6H9 321 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 MINDY4Q4G0A6 757 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF613Q6PF04 617 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 TMEM220Q6QAJ8 160 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 OAFQ86UD1 273 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 VRK2Q86Y07 508 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms