RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MAGEE2Q8TD90 523 aaPredicted RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 APOBEC4Q8WW27 367 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 ADIPOR1Q96A54 375 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 C8orf44Q96CB5 159 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 PIP5K1AQ99755 562 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 RSPO3Q9BXY4 272 aaPredicted RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 NXF5Q9H1B4 397 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 TESMINQ9Y4I5 508 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 KNTC1P50748 2209 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 FRG2CA6NGY1 282 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 H0YJX3 145 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 UGT2B17O75795 530 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 DNAJB5O75953 348 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 SEC24DO94855 1032 aaPredicted RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 RASAL1O95294 804 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 IGHEP01854 428 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 HSPA13P48723 471 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 SPIBQ01892 262 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 SHQ1Q6PI26 577 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 HSDL2Q6YN16 418 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 DEF8Q6ZN54 512 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 TIPARPQ7Z3E1 657 aaKnown RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 ESX1Q8N693 406 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 VMP1Q96GC9 406 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 PHOX2BQ99453 314 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 SPRY4Q9C004 299 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 SEMA4CQ9C0C4 833 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 WWTR1Q9GZV5 400 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 FOXJ2Q9P0K8 574 aa13.98□□□□□ -0.17
GINS3-203ENST00000426538 ZFHX2Q9C0A1 2572 aaPredicted RBP13.98□□□□□ -0.17
GINS3-203ENST00000426538 NPIPA5A0A0B4J1W7 369 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 NPIPA7E9PJI5 369 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 J3KTA2 159 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 M0R3H8 397 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 TNFRSF11BO00300 401 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 PEX12O00623 359 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 EI24O14681 340 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 PRKNO60260 465 aaPredicted RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 IGKV1D-16P01601 117 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 RAB40ALP0C0E4 278 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 NPIPA8P0DM63 369 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 NID1P14543 1247 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 FPR1P21462 350 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 KRT20P35900 424 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 DCTP40126 519 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 NR0B1P51843 470 aaKnown RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 RPS15P62841 145 aaKnown RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 RNF4P78317 190 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 FAM69BQ5VUD6 431 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 TSEN54Q7Z6J9 526 aaKnown RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 ZNF614Q8N883 585 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 NFAM1Q8NET5 270 aaPredicted RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 NRBF2Q96F24 287 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 EPYCQ99645 322 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 MESP1Q9BRJ9 268 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 RLIMQ9NVW2 624 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 PPIEQ9UNP9 301 aaKnown RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 FARSAQ9Y285 508 aaKnown RBP13.97□□□□□ -0.17
GINS3-203ENST00000426538 NINQ8N4C6 2090 aa13.97□□□□□ -0.17
GINS3-203ENST00000426538 CDC14CA4D256 554 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 TM4SF5O14894 197 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 GADD45GO95257 159 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 EPPINO95925 133 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 UMODP07911 640 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 ACADSP16219 412 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 RPS4Y1P22090 263 aaKnown RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 IFNA8P32881 189 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 NOVA1P51513 510 aaKnown RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 ATP12AP54707 1039 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 CDH12P55289 794 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 GANABQ14697 944 aaKnown RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 MAPK14Q16539 360 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.96□□□□□ -0.17
GINS3-203ENST00000426538 TCTN3Q6NUS6 607 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 TBPL2Q6SJ96 375 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 ZNF836Q6ZNA1 936 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 ZAR1Q86SH2 424 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 RBM45Q8IUH3 476 aaKnown RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 LACC1Q8IV20 430 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 NLGN4XQ8N0W4 816 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 CLIP4Q8N3C7 705 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 APCDD1LQ8NCL9 501 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 C17orf47Q8NEP4 570 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 NLGN4YQ8NFZ3 816 aaPredicted RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 OR4D11Q8NGI4 311 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 OR6T1Q8NGN1 323 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 HSPBAP1Q96EW2 488 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 RBM4BQ9BQ04 359 aaKnown RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 WDR77Q9BQA1 342 aaPredicted RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 RBM4Q9BWF3 364 aaKnown RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 B3GNT4Q9C0J1 378 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 NRSN2Q9GZP1 204 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 HOXD1Q9GZZ0 328 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 VNN3Q9NY84 501 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 PCDHGA10Q9Y5H3 936 aa13.96□□□□□ -0.17
GINS3-203ENST00000426538 MAGED1Q9Y5V3 778 aaPredicted RBP13.96□□□□□ -0.17
GINS3-203ENST00000426538 LOC102723996A0A087X1L8 192 aa13.95□□□□□ -0.18
GINS3-203ENST00000426538 CLDN24A6NM45 220 aa13.95□□□□□ -0.18
GINS3-203ENST00000426538 IL33O95760 270 aa13.95□□□□□ -0.18
GINS3-203ENST00000426538 HPGDP15428 266 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms