RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 ANKRD28O15084 1053 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 CFLARO15519 480 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 FADS1O60427 444 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 SASH3O75995 380 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 UTS2O95399 124 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 HMGN2P05204 90 aaKnown RBP12.4□□□□□ -0.42
SNX3-204ENST00000426155 C21orf58P58505 322 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 HBA1P69905 142 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 PSPHP78330 225 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 PRR5P85299 388 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 PMPCAQ10713 525 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 SMU1Q2TAY7 513 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 GRAMD1BQ3KR37 738 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 SLC9B1Q4ZJI4 515 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 EXOSC6Q5RKV6 272 aaKnown RBP12.4□□□□□ -0.42
SNX3-204ENST00000426155 WLSQ5T9L3 541 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 ATG16L1Q676U5 607 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 APOOLQ6UXV4 268 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 CAMKMTQ7Z624 323 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 MARCH3Q86UD3 253 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 ANKRD46Q86W74 232 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 PLCZ1Q86YW0 608 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 ULK2Q8IYT8 1036 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 CDRT4Q8N9R6 151 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 RAB3IL1Q8TBN0 382 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 OR5P2Q8WZ92 322 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 CDS1Q92903 461 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 CHMP6Q96FZ7 201 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 TEX37Q96LM6 180 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 UGT2B28Q9BY64 529 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 DPY30Q9C005 99 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 BHLHE41Q9C0J9 482 aaPredicted RBP12.4□□□□□ -0.42
SNX3-204ENST00000426155 C3orf14Q9HBI5 128 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 RNF6Q9Y252 685 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 HDAC3O15379 428 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 GMFGO60234 142 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 KCNH1O95259 989 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 CLDN14O95500 239 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 GLI4P10075 376 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 DDX5P17844 614 aaKnown RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 BMP7P18075 431 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 HTR1EP28566 365 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 CCT3P49368 545 aaKnown RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 PHC1P78364 1004 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 ART3Q13508 389 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 SPDYE7PQ495Y7 208 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 SPANXN4Q5MJ08 99 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 C1orf185Q5T7R7 199 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 OGFOD2Q6N063 350 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 XKRXQ6PP77 449 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 B3GNT6Q6ZMB0 384 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 GATSQ8NAP1 163 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 OR14L1PQ8NHC6 308 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 PSMA8Q8TAA3 256 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 ZNF75CPQ92670 426 aaPredicted RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 PRPF18Q99633 342 aaKnown RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 TIMP4Q99727 224 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 SH3GL2Q99962 352 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 OR2B2Q9GZK3 357 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 SERHL2Q9H4I8 314 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 AIG1Q9NVV5 245 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 GPATCH2Q9NW75 528 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 MED11Q9P086 117 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 PPP4R1LQ9P1A2 415 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 RPH3AQ9Y2J0 694 aaPredicted RBP12.39□□□□□ -0.43
SNX3-204ENST00000426155 KCNE3Q9Y6H6 103 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 ITPR2Q14571 2701 aa12.39□□□□□ -0.43
SNX3-204ENST00000426155 DOCK7Q96N67 2140 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 NPIPA5A0A0B4J1W7 369 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 NKX2-6A6NCS4 301 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 NPIPA7E9PJI5 369 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 ZNF195O14628 629 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 SCN2BO60939 215 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 WDR1O75083 606 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 CBR3O75828 277 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 KCNK2O95069 426 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 C1QCP02747 245 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 SNRPB2P08579 225 aaKnown RBP12.38□□□□□ -0.43
SNX3-204ENST00000426155 ALOX5P09917 674 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 NPIPA8P0DM63 369 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 IL12AP29459 219 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 ADH7P40394 386 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 CASP9P55211 416 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 UFM1P61960 85 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 VPS26BQ4G0F5 336 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 VASNQ6EMK4 673 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 SEM1Q6ZVN7 128 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 HDXQ7Z353 690 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 TRIM42Q8IWZ5 723 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 KIRREL3Q8IZU9 778 aa12.38□□□□□ -0.43
SNX3-204ENST00000426155 EID3Q8N140 333 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms